RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RECKO95980 971 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 KLK3P07288 261 aaPredicted RBP12.99□□□□□ -0.33
VCX3A-202ENST00000398729 MSL3P1P0C860 447 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 ST6GAL1P15907 406 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 CASRP41180 1078 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 TTPAP49638 278 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 CRADDP78560 199 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 CDK16Q00536 496 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 ERV3-1Q14264 604 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 SEMA3AQ14563 771 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 NAPRTQ6XQN6 538 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 ADGRF3Q8IZF5 1079 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 PRELID2Q8N945 189 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 OR5K2Q8NHB8 316 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 NRTNQ99748 197 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 GPR87Q9BY21 358 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 TREX1Q9NSU2 369 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 ICKQ9UPZ9 632 aa12.99□□□□□ -0.33
VCX3A-202ENST00000398729 TDRKHQ9Y2W6 561 aaKnown RBP12.99□□□□□ -0.33
VCX3A-202ENST00000398729 TMEM150CB9EJG8 249 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 PRMT5O14744 637 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 CREG1O75629 220 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 APOA4P06727 396 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 TPSB2P20231 275 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 NMBRP28336 390 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 CCR7P32248 378 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 CSE1LP55060 971 aaKnown RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 SARNPP82979 210 aaKnown RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 HSPA14Q0VDF9 509 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 TPSAB1Q15661 275 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 DNAJC21Q5F1R6 531 aaKnown RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 ATP1A1-AS1Q5TC04 95 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 PTRHD1Q6GMV3 140 aaKnown RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 LRRC8BQ6P9F7 803 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 SPESP1Q6UW49 350 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 UNC5AQ6ZN44 842 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 SLC22A15Q8IZD6 547 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 MPP5Q8N3R9 675 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 ASZ1Q8WWH4 475 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 SEC14L1Q92503 715 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 CPT1BQ92523 772 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 MR1Q95460 341 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 ZNF71Q9NQZ8 489 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 SERTAD3Q9UJW9 196 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 TTC7AQ9ULT0 858 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-202ENST00000398729 POLHQ9Y253 713 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
VCX3A-202ENST00000398729 CDC14CA4D256 554 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 IQCF5A8MTL0 148 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 NDUFS3O75489 264 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 RPN2P04844 631 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 CHRM5P08912 532 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 PVRP15151 417 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 UGT2B7P16662 529 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 CYP2A7P20853 494 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 MGAT1P26572 445 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 PTPN4P29074 926 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 RPS15P62841 145 aaKnown RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 GPS2Q13227 327 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 TMED2Q15363 201 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 FAM199XQ6PEV8 388 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 OTUD6BQ8N6M0 293 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 C9orf43Q8TAL5 461 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 GSDMBQ8TAX9 411 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 N4BP2L2Q92802 583 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 PBKQ96KB5 322 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 LRFN5Q96NI6 719 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 PANX3Q96QZ0 392 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 AP1M1Q9BXS5 423 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 TWSG1Q9GZX9 223 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 KLHL25Q9H0H3 589 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 ACTL8Q9H568 366 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 AKIRIN1Q9H9L7 192 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 MRM3Q9HC36 420 aaKnown RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 MARCH4Q9P2E8 410 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-202ENST00000398729 GNPTGQ9UJJ9 305 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 PLAAQ9Y263 795 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 KCNMB2Q9Y691 235 aa12.97□□□□□ -0.33
VCX3A-202ENST00000398729 LRBAP50851 2863 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
VCX3A-202ENST00000398729 MEN1O00255 615 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 KPNA5O15131 536 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 GPC4O75487 556 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 FURINP09958 794 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 AOAHP28039 575 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 VPS41P49754 854 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 ABRQ12979 859 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 GPS1Q13098 491 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 C4orf17Q53FE4 359 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
VCX3A-202ENST00000398729 ARMC3Q5W041 872 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms