RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ELK4P28324 431 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 HTR2BP41595 481 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 KPNA2P52292 529 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 UFM1P61960 85 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 HERVK_113P63132 956 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SQLEQ14534 574 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PTPRNQ16849 979 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CYP51A1Q16850 503 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SGO1Q5FBB7 561 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ZRANB3Q5FWF4 1079 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MANEALQ5VSG8 457 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PSAPL1Q6NUJ1 521 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRSS55Q6UWB4 352 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 GLB1LQ6UWU2 654 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 RSPO2Q6UXX9 243 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 USP51Q70EK9 711 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 LARP4Q71RC2 724 aaKnown RBP eCLIP4.93□□□□□ -1.62
SSR1-202ENST00000397511 GLT6D1Q7Z4J2 308 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SERINC5Q86VE9 423 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MON1AQ86VX9 555 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 LEMD2Q8NC56 503 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 OR52B6Q8NGF0 335 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 OR10Q1Q8NGQ4 319 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 OR4L1Q8NH43 312 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ARRDC2Q8TBH0 407 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ARMC5Q96C12 935 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PKMYT1Q99640 499 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 KCTD14Q9BQ13 255 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 UQCC2Q9BRT2 126 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SLC25A23Q9BV35 468 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ERVK-6Q9BXR3 956 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRKD2Q9BZL6 878 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ANKHQ9HCJ1 492 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 LTB4R2Q9NPC1 389 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 NECTIN3Q9NQS3 549 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 AGPAT4Q9NRZ5 378 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CATSPERZQ9NTU4 200 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PAQR5Q9NXK6 330 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 VPS4AQ9UN37 437 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 NDUFAF1Q9Y375 327 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MAGED1Q9Y5V3 778 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRUNE2Q8WUY3 3088 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MYO16Q9Y6X6 1858 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 A6NJY4 79 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 AQP12BA6NM10 295 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 POM121CA8CG34 1229 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ZBBXA8MT70 800 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 STK25O00506 426 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 AZIN1O14977 448 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PDPK1O15530 556 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TBX1O43435 398 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 B4GAT1O43505 415 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 DUSP11O75319 330 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 MTHFD2P13995 350 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CTPS1P17812 591 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 GKP32189 559 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SGSHP51688 502 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CLCN5P51795 746 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 OR2B6P58173 313 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 DSTNP60981 165 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TIAL1Q01085 375 aaKnown RBP eCLIP4.93□□□□□ -1.623e-7■■■□□ 14.9
SSR1-202ENST00000397511 CAP1Q01518 475 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRKCZQ05513 592 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TARDBPQ13148 414 aaKnown RBP eCLIP4.93□□□□□ -1.622e-15■■□□□ 11.6
SSR1-202ENST00000397511 EIF4EBP2Q13542 120 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 FRG1Q14331 258 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 CTF1Q16619 201 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 UGT3A2Q3SY77 523 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PAGE3Q5JUK9 113 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CLLU1OSQ5K130 101 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ARTNQ5T4W7 220 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CCNJQ5T5M9 372 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 NDUFAF5Q5TEU4 345 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CCBE1Q6UXH8 406 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRR23BQ6ZRT6 265 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PAGE2Q7Z2X7 111 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 KCTD20Q7Z5Y7 419 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TMEM173Q86WV6 379 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 AQP12AQ8IXF9 295 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PIANPQ8IYJ0 282 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 FBXO39Q8N4B4 442 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MDGA1Q8NFP4 955 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 EEF1AKMT1Q8WVE0 214 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 STON2Q8WXE9 905 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 UPF1Q92900 1129 aaKnown RBP eCLIP4.93□□□□□ -1.622e-12■■■■■ 30.2
SSR1-202ENST00000397511 MUL1Q969V5 352 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PMEPA1Q969W9 287 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 MTFMTQ96DP5 389 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 TSPAN17Q96FV3 270 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PPM1MQ96MI6 270 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 POLR1EQ9GZS1 481 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 DSN1Q9H410 356 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 NARFLQ9H6Q4 476 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 HPS4Q9NQG7 708 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 INTS7Q9NVH2 962 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 FAM8A1Q9UBU6 413 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 POLG2Q9UHN1 485 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TLR6Q9Y2C9 796 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ZFP37Q9Y6Q3 630 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 E5RI56 91 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms