RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PLLPQ9Y342 182 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 TOR1BO14657 336 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CRYZL1O95825 349 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CYP11A1P05108 521 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 RAP2AP10114 183 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.31e-10■■■■■ 34.2
USP49-203ENST00000394253 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ZNF829Q3KNS6 432 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 POTEKPQ9BYX7 375 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 DLGAP1O14490 977 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 AP2A1O95782 977 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 HMGN1P05114 100 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ZNF16P17020 682 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 ERVK-9P63128 1117 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CREMQ03060 361 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 PARGQ86W56 976 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 SCUBE3Q8IX30 993 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 SHKBP1Q8TBC3 707 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ELP5Q8TE02 316 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 TMEM246Q9BRR3 403 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 TMEM39BQ9GZU3 492 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 OR51V1Q9H2C8 321 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ADCY10Q96PN6 1610 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 PNLIPRP1P54315 467 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 TAS2R39P59534 338 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ADGRE1Q14246 886 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 STRA6Q9BX79 667 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 FBXL3Q9UKT7 428 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CRTAPO75718 401 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 SLITRK5O94991 958 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 HCKP08631 526 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 BCKDHAP12694 445 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 PRKXP51817 358 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 GPR135Q8IZ08 494 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 IGSF9Q9P2J2 1179 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CYP1A2P05177 515 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 ABCG1P45844 678 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 SMSP52788 366 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 ZER1Q7Z7L7 766 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 TM9SF2Q99805 663 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 KCNS2Q9ULS6 477 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 GPR89AB7ZAQ6 455 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 GPR89BP0CG08 455 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 SLC6A3Q01959 620 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 CUZD1Q86UP6 607 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PROKR2Q8NFJ6 384 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 FRZBQ92765 325 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 SLC7A8Q9UHI5 535 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PCDHB5Q9Y5E4 795 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 C1QTNF3-AMACRE9PGA6 284 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 CYP11B2P19099 503 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 GSTM3P21266 225 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 CAPZA1P52907 286 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 PON2Q15165 354 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 CDT1Q9H211 546 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 RAB19A4D1S5 217 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PRORSD1PA6NEY8 169 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 CACNB4O00305 520 aaPredicted RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 SFTPBP07988 381 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 IL3P08700 152 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PRDX5P30044 214 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 HTR2BP41595 481 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 XAGE5Q8WWM1 108 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 EDEM1Q92611 657 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 NDUFB10O96000 172 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PEX2P28328 305 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 ZBED6CLQ96FA7 236 aaPredicted RBP13.19□□□□□ -0.3
USP49-203ENST00000394253 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 UNC93B1Q9H1C4 597 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 C20orf202A1L168 122 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 GSG1L2A8MUP6 293 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 SULT1C2O00338 296 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 RARAP10276 462 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 COL6A1P12109 1028 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 OR12D2P58182 307 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 OR4L1Q8NH43 312 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 LURAP1Q96LR2 239 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
USP49-203ENST00000394253 RHOJQ9H4E5 214 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms