RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 IDNKQ5T6J7 187 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF517Q6ZMY9 492 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ERVW-1Q9UQF0 538 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 C9IYK1 514 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 F8VP50 259 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 GJA9P57773 515 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 CRTC2Q53ET0 693 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 TCTEX1D2Q8WW35 142 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZSCAN5AQ9BUG6 496 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 CTNNB1P35222 781 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF132P52740 706 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 PUM1Q14671 1186 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 BRMS1LQ5PSV4 323 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 RHOJQ9H4E5 214 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 TMPRSS4Q9NRS4 437 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 NUDT4Q9NZJ9 180 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 SALL1Q9NSC2 1324 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ADH1AP07327 375 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 IL7RP16871 459 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 GDI2P50395 445 aaKnown RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 SCNN1GP51170 649 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 RPL6Q02878 288 aaKnown RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 PRAMEF19Q5SWL8 479 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ISLR2Q6UXK2 745 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 CPA6Q8N4T0 437 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 NOP16Q9Y3C1 178 aaKnown RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ANKRD63C9JTQ0 380 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 SNX3O60493 162 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ATE1O95260 518 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 IL3P08700 152 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZSCAN5DPP0CG00 497 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 SLC7A1P30825 629 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 AADACL2Q6P093 401 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 HTR3EA5X5Y0 456 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 FBP2O00757 339 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 IFNA17P01571 189 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 GALK1P51570 392 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 SLC9B2Q86UD5 537 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 COX18Q8N8Q8 333 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 TRIM43Q96BQ3 446 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 LINGO1Q96FE5 620 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF578Q96N58 590 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ALG2Q9H553 416 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 NDUFAF4Q9P032 175 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 CDC14AQ9UNH5 594 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 I3L521 148 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 S100A10P60903 97 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF169Q14929 603 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 GET4Q7L5D6 327 aaPredicted RBP14.49□□□□□ -0.09
CCDC50-201ENST00000392455 LAS2Q8IYD9 372 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 DNAAF1Q8NEP3 725 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 TERB2Q8NHR7 220 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 TAS2R3Q9NYW6 316 aa14.49□□□□□ -0.09
CCDC50-201ENST00000392455 BUD23O43709 281 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 CPNE3O75131 537 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 THEGLP0DJG4 465 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 RAB4AP20338 218 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 SLC6A6P31641 620 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 CYP4F8P98187 520 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 DDR1Q08345 913 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 NDC1Q9BTX1 674 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TCRBV5S4A2TA0A5A2 114 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 A8MXE2 369 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 CELF3Q5SZQ8 465 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TMEM164Q5U3C3 297 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 FOXR1Q6PIV2 292 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ARL9Q6T311 187 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TMEM100Q9NV29 134 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 KIAA1522Q9P206 1035 aaPredicted RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 NRCAMQ92823 1304 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 RIC1Q4ADV7 1423 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 MRPS6P82932 125 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 AUHQ13825 339 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 PARP15Q460N3 678 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 FAM35AQ86V20 835 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 PARGQ86W56 976 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF558Q96NG5 402 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TM6SF2Q9BZW4 377 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ABCB9Q9NP78 766 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 MPIP34949 423 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 SOX9P48436 509 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ATAD1Q8NBU5 361 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 MFSD3Q96ES6 412 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 MCMBPQ9BTE3 642 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ADAM18Q9Y3Q7 739 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 TRUB2O95900 331 aaKnown RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF35P13682 527 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 CCR10P46092 362 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 NRIP1P48552 1158 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 DHCR24Q15392 516 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 AHSA2Q719I0 299 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ABHD13Q7L211 337 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 SMIM15Q7Z3B0 74 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 BBS1Q8NFJ9 593 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 PORCNQ9H237 461 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 SCGB1D2O95969 90 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 C8GP07360 202 aa14.48□□□□□ -0.09
CCDC50-201ENST00000392455 ZNF143P52747 638 aaPredicted RBP14.48□□□□□ -0.09
CCDC50-201ENST00000392455 MLC1Q15049 377 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms