RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CLCN5P51795 746 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 GRB14Q14449 540 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 CCNJQ5T5M9 372 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 KLHDC8BQ8IXV7 354 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 AADATQ8N5Z0 425 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 ZMIZ2Q8NF64 920 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 VAT1Q99536 393 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 TRAPPC4Q9Y296 219 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 COL1A2P08123 1366 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 PSMD3O43242 534 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 GSTM1P09488 218 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 CYP4B1P13584 511 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 IGFBP5P24593 272 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 PTGS2P35354 604 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 SERPINH1P50454 418 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 KEAP1Q14145 624 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 IRF3Q14653 427 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 AAK1Q2M2I8 961 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 SOWAHCQ53LP3 525 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 HECTD2Q5U5R9 776 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 RAP1GAP2Q684P5 730 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 HIPK1Q86Z02 1210 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 OR8H2Q8N162 312 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 PNPLA1Q8N8W4 532 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 KBTBD8Q8NFY9 601 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 NDRG1Q92597 394 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 EXT2Q93063 718 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 ACOX2Q99424 681 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 TBL1YQ9BQ87 522 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 TINF2Q9BSI4 451 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 RIBC2Q9H4K1 309 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 RNF167Q9H6Y7 350 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 NUFIP1Q9UHK0 495 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 U3KQV3 271 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 NOS1APO75052 506 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 CTGFP29279 349 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 HNF4AP41235 474 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 RAD51Q06609 339 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 MAD2L1BPQ15013 274 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 PXDC1Q5TGL8 231 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 KIAA0930Q6ICG6 404 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 LIX1LQ8IVB5 337 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 APOL4Q9BPW4 351 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 NXF3Q9H4D5 531 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 LEUTXA8MZ59 168 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 TRIM77I1YAP6 450 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 HOXA11P31270 313 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 KRT20P35900 424 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 PIK3CBP42338 1070 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 RPL34P49207 117 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 CDKN2DP55273 166 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 RBP5P82980 135 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 AHSA2Q719I0 299 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 EFL1Q7Z2Z2 1120 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 PROKR1Q8TCW9 393 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 GIMAP1Q8WWP7 306 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 DPF3Q92784 378 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 NFKBIZQ9BYH8 718 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 ZIM2Q9NZV7 527 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 ERVW-1Q9UQF0 538 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 GMPPBQ9Y5P6 360 aa14.37□□□□□ -0.11
VPS9D1-201ENST00000389386 GSTA4O15217 222 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 CACNG3O60359 315 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 UQCRC1P31930 480 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 LIMK1P53667 647 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 BNC1Q01954 994 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM187BQ17R55 369 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 DUSP28Q4G0W2 176 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 SLC46A3Q7Z3Q1 461 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 ZFAND4Q86XD8 727 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 GLB1L3Q8NCI6 653 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 OR4M1Q8NGD0 313 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 BRSK1Q8TDC3 778 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 SH3RF2Q8TEC5 729 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 FCGR1BQ92637 280 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 Q96MT0 163 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 BEX2Q9BXY8 128 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 ASB7Q9H672 318 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 POLHQ9Y253 713 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 LOC100506127A0A0U1RQW1 187 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 STAU1O95793 577 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 MT-CYBP00156 380 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 PAMP19021 973 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms