RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 ATP2A1O14983 1001 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 LDLRAD4O15165 306 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 MAGEB4O15481 346 aaPredicted RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 JRKO75564 520 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 S100BP04271 92 aaPredicted RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 SLC2A2P11168 524 aaPredicted RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 ZNF182P17025 639 aaPredicted RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 PTPN3P26045 913 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 IGBP1P78318 339 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 UBE2V1Q13404 147 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 MVPQ14764 893 aaKnown RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 TNIP1Q15025 636 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 C20orf194Q5TEA3 1177 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 KRT39Q6A163 491 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 FAM109BQ6ICB4 259 aaPredicted RBP0.47□□□□□ -2.33
SNORA40-201ENST00000388090 LINGO4Q6UY18 593 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 RNF130Q86XS8 419 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 C4orf32Q8N8J7 132 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 RNF138Q8WVD3 245 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 RUBCNQ92622 972 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 RILPL2Q969X0 211 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 EGLN2Q96KS0 407 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 KLHL15Q96M94 604 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 TBX15Q96SF7 602 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 UBAC1Q9BSL1 405 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 HOXD1Q9GZZ0 328 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 SHARPINQ9H0F6 387 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 CPVLQ9H3G5 476 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 PLSCR3Q9NRY6 295 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 HCN3Q9P1Z3 774 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 GRHPRQ9UBQ7 328 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 MEGF6O75095 1541 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 MYO10Q9HD67 2058 aa0.47□□□□□ -2.33
SNORA40-201ENST00000388090 KIR2DS1A0A191URI9 304 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 LRCOL1A6NCL2 159 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 AVILO75366 819 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 GJB3O75712 270 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 PCP11498 1178 aaKnown RBP0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ANPEPP15144 967 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 VEGFAP15692 232 aaPredicted RBP0.46□□□□□ -2.34
SNORA40-201ENST00000388090 IL7RP16871 459 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 GIFP27352 417 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ELK3P41970 407 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 XGP55808 180 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 IRX4P78413 519 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 UBE4AQ14139 1066 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 KIR2DS1Q14954 304 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF146Q15072 292 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ANKRD1Q15327 319 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 FAM189A2Q15884 450 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 PDLIM3Q53GG5 364 aaPredicted RBP0.46□□□□□ -2.34
SNORA40-201ENST00000388090 WDR45BQ5MNZ6 344 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 MARC1Q5VT66 337 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 SRLQ86TD4 932 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 CEP97Q8IW35 865 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 LINC01006Q8NI28 216 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 FAM122AQ96E09 287 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 FAM218AQ96MZ4 157 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ABHD6Q9BV23 337 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 MXD3Q9BW11 206 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 WDR12Q9GZL7 423 aaKnown RBP0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ARRDC1-AS1Q9H2J1 176 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 KIF9Q9HAQ2 790 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 ASAH2Q9NR71 780 aa0.46□□□□□ -2.34
SNORA40-201ENST00000388090 SPIN1Q9Y657 262 aaPredicted RBP0.46□□□□□ -2.34
SNORA40-201ENST00000388090 CDC42BPBQ9Y5S2 1711 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 MED19A0JLT2 244 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 PINLYPA6NC86 204 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 GAGE10A6NGK3 116 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 K7EQD1 137 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 MAP2K7O14733 419 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 NXPH4O95158 308 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 VENTXO95231 258 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 CSTBP04080 98 aaKnown RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 PRCPP42785 496 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ABCE1P61221 599 aaKnown RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 UFM1P61960 85 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ICA1Q05084 483 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 GAGE2BQ13066 116 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF177Q13360 481 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 DCTN2Q13561 401 aaKnown RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 TDGQ13569 410 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 GAGE2EQ4V326 116 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF658BQ4V348 819 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 CCDC181Q5TID7 509 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 GAGE2AQ6NT46 116 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 IRGCQ6NXR0 463 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 CCDC174Q6PII3 467 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 RRM2BQ7LG56 351 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 CCDC190Q86UF4 302 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 APOBEC4Q8WW27 367 aaKnown RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 SLC22A12Q96S37 553 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 PANK2Q9BZ23 570 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF701Q9NV72 531 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 TRMT1Q9NXH9 659 aaKnown RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 WSB2Q9NYS7 404 aaPredicted RBP0.45□□□□□ -2.34
SNORA40-201ENST00000388090 ABI3Q9P2A4 366 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 GAGE2DQ9UEU5 116 aa0.45□□□□□ -2.34
SNORA40-201ENST00000388090 TSPYL4Q9UJ04 414 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms