RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 EMC3Q9P0I2 261 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 MAGEL2Q9UJ55 1249 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 CNTN6Q9UQ52 1028 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 STON1Q9Y6Q2 735 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 U3KQ87 197 aa14.75□□□□□ -0.05
VLDLR-202ENST00000382099 WASHC1A8K0Z3 465 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 NT5C1B-RDH14C9J2C7 533 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 F8W810 466 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SCAMP3O14828 347 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 GMDSO60547 372 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 TGFB3P10600 412 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 HOXD8P13378 290 aaPredicted RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 RYKP34925 604 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 HNF1BP35680 557 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 MAGEA11P43364 429 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 CAPZA2P47755 286 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SMSP52788 366 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ZNF284Q2VY69 593 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ZC3HC1Q86WB0 502 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 OR52H1Q8NGJ2 320 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 COA1Q9GZY4 146 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SPNS1Q9H2V7 528 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SMURF1Q9HCE7 757 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 LRRC37AA6NMS7 1700 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ZNF487B1APH4 448 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 PPP6CO00743 305 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 MED7O43513 233 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 IPO13O94829 963 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ENDOD1O94919 500 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 C1RP00736 705 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 MYL3P08590 195 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ACADMP11310 421 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ERCC2P18074 760 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 ATXN1P54253 815 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SEMA3BQ13214 749 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 PYDC2Q56P42 97 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 OR8K5Q8NH50 307 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 RBPMSQ93062 196 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 SECISBP2Q96T21 854 aaKnown RBP14.74□□□□□ -0.05
VLDLR-202ENST00000382099 GPR22Q99680 433 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 TMEM39BQ9GZU3 492 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 RERGLQ9H628 205 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 KLHL21Q9UJP4 597 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 MGAT4AQ9UM21 535 aa14.74□□□□□ -0.05
VLDLR-202ENST00000382099 A8MT66 165 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SH3BP5O60239 455 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 NMBRP28336 390 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SSTR2P30874 369 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 HTR7P34969 479 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ZNF699Q32M78 642 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SPDYE7PQ495Y7 208 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 HDDC2Q7Z4H3 204 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 LAX1Q8IWV1 398 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ADHFE1Q8IWW8 467 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 TTC16Q8NEE8 873 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 P2RY11Q96G91 374 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 PPP1R16BQ96T49 567 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 RHOJQ9H4E5 214 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 CARS2Q9HA77 564 aaKnown RBP14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SP110Q9HB58 689 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ABCB9Q9NP78 766 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 MID1IP1Q9NPA3 183 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 HPF1Q9NWY4 346 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SYNJ2BP-COX16A0A087WUM0 186 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 RAB19A4D1S5 217 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 PTP4A3O75365 173 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 RFPL3O75679 317 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 CDK14O94921 469 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 AHSGP02765 367 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 DCTP40126 519 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 GDI2P50395 445 aaKnown RBP14.73□□□□□ -0.05
VLDLR-202ENST00000382099 CLCN7P51798 805 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 NUDT6P53370 316 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 KDELC1Q6UW63 502 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 CYP4Z1Q86W10 505 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 FAM217AQ8IXS0 508 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 KLHL6Q8WZ60 621 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 HYLS1Q96M11 299 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 KCNA7Q96RP8 456 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 CNPPD1Q9BV87 410 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 RANBP3Q9H6Z4 567 aaPredicted RBP14.73□□□□□ -0.05
VLDLR-202ENST00000382099 COX16Q9P0S2 106 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 KIF17Q9P2E2 1029 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ZNF222Q9UK12 451 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 LY75O60449 1722 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 M0R082 166 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 FABP7O15540 132 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SSX5O60225 188 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 PRSS23O95084 383 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ATG7O95352 703 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 ITGB1P05556 798 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 SLC10A3P09131 477 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 MYCLP12524 364 aaPredicted RBP14.73□□□□□ -0.05
VLDLR-202ENST00000382099 NUP62P37198 522 aaPredicted RBP14.73□□□□□ -0.05
VLDLR-202ENST00000382099 PIK3CBP42338 1070 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 KIR2DL3P43628 341 aa14.73□□□□□ -0.05
VLDLR-202ENST00000382099 EEFSECP57772 596 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms