RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 A6NL46 340 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 LIN7AO14910 233 aaPredicted RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 PSMD3O43242 534 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 ZNF749O43361 778 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 RECKO95980 971 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 CHRM5P08912 532 aaPredicted RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 ACADLP28330 430 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 PGDP52209 483 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 ITGA1P56199 1179 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 SRSF1Q07955 248 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHOX-202ENST00000381575 CDH17Q12864 832 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 RAPSNQ13702 412 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 SEMA3AQ14563 771 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 ITIH4Q14624 930 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 SLC9A5Q14940 896 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 NADK2Q4G0N4 442 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 C1orf189Q5VU69 101 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 IZUMO3Q5VZ72 239 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 PACS1Q6VY07 963 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 LINC00523Q86TU6 105 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 LDB1Q86U70 411 aaPredicted RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 HOOK3Q86VS8 718 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 VRK3Q8IV63 474 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 TMEM151BQ8IW70 566 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 C2orf73Q8N5S3 287 aaPredicted RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 C19orf47Q8N9M1 422 aaKnown RBP13.69□□□□□ -0.22
SHOX-202ENST00000381575 ADAMTS17Q8TE56 1095 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 THAP4Q8WY91 577 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 COL26A1Q96A83 441 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 MIB2Q96AX9 1013 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 SLC25A23Q9BV35 468 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 ACSS2Q9NR19 701 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 LUZP4Q9P127 313 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 GUCA1BQ9UMX6 200 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 ZNF148Q9UQR1 794 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 PCM1Q15154 2024 aa13.69□□□□□ -0.22
SHOX-202ENST00000381575 CENPEQ02224 2701 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 NUP210LQ5VU65 1888 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 SLC5A10A0PJK1 596 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 IQCF5A8MTL0 148 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 E7EQ34 232 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 E7EVH7 732 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 FTH1P02794 183 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 ZSCAN5DPP0CG00 497 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 PSMA3P25788 255 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 PEBP1P30086 187 aaKnown RBP13.68□□□□□ -0.22
SHOX-202ENST00000381575 UQCRFS1P47985 274 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 ATP1A4Q13733 1029 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 TSTD2Q5T7W7 516 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 AFTPHQ6ULP2 937 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 ZNF534Q76KX8 674 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 OR6P1Q8NGX9 317 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 CFAP61Q8NHU2 1237 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 FLVCR1-AS1Q8TAF5 88 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
SHOX-202ENST00000381575 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.22
SHOX-202ENST00000381575 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 OR2A14Q96R47 310 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 NLNQ9BYT8 704 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 SPRTNQ9H040 489 aaPredicted RBP13.68□□□□□ -0.22
SHOX-202ENST00000381575 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 SERTAD3Q9UJW9 196 aa13.68□□□□□ -0.22
SHOX-202ENST00000381575 HEATR9A2RTY3 570 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 ZNF185O15231 689 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 MAP3K7O43318 606 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 OR56A5P0C7T3 313 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 CBSLP0DN79 551 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 OTX2P32243 289 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 SHMT2P34897 504 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 CBSP35520 551 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 CRADDP78560 199 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
SHOX-202ENST00000381575 NCF4Q15080 339 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 ZNF385CQ66K41 422 aaPredicted RBP13.67□□□□□ -0.22
SHOX-202ENST00000381575 SLC13A5Q86YT5 568 aaPredicted RBP13.67□□□□□ -0.22
SHOX-202ENST00000381575 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 ZBTB2Q8N680 514 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 OR5K2Q8NHB8 316 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 SEC14L1Q92503 715 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 IL17FQ96PD4 163 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 IRAK4Q9NWZ3 460 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 MARCH4Q9P2E8 410 aaPredicted RBP13.67□□□□□ -0.22
SHOX-202ENST00000381575 ANKMY1Q9P2S6 941 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 DHCR7Q9UBM7 475 aaKnown RBP13.67□□□□□ -0.22
SHOX-202ENST00000381575 TCAF1Q9Y4C2 921 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 SVILO95425 2214 aa13.67□□□□□ -0.22
SHOX-202ENST00000381575 HEATR5BQ9P2D3 2071 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 A0A0J9YY10 115 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TTLL8A6PVC2 850 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 MASP2O00187 686 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 OR2B3O76000 313 aa13.66□□□□□ -0.22
SHOX-202ENST00000381575 TMEM63AO94886 807 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms