RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PSMD8P48556 350 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM189BP81408 668 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CPSF6Q16630 551 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 KANK2Q63ZY3 851 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 AQP12AQ8IXF9 295 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 PNPT1Q8TCS8 783 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 BRSK1Q8TDC3 778 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 TTYH2Q9BSA4 534 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ARHGAP39Q9C0H5 1083 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 IKZF5Q9H5V7 419 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 VAPAQ9P0L0 249 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 USP34Q70CQ2 3546 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 MITFO75030 526 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 VPS26AO75436 327 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 HOXD8P13378 290 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 PIGAP37287 484 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 GP2P55259 537 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 HUNKP57058 714 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ABRAXAS2Q15018 415 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CRY1Q16526 586 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 COLEC12Q5KU26 742 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 Q6ZSR9 355 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SPRED1Q7Z699 444 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 MINDY1Q8N5J2 469 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 TP53I13Q8NBR0 393 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 OR6Q1Q8NGQ2 317 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 BDH2Q9BUT1 245 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 BOCQ9BWV1 1114 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CPNE5Q9HCH3 593 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SARDHQ9UL12 918 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 MED16Q9Y2X0 877 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 MIA3Q5JRA6 1907 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 HAS3O00219 553 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SSX4O60224 188 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 GJB5O95377 273 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ZNF682O95780 498 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 FTH1P02794 183 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SGSHP51688 502 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 IL2P60568 153 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SERINC3Q13530 473 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 HIST2H2ACQ16777 129 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SETMARQ53H47 684 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 USP51Q70EK9 711 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 UMODL1-AS1Q8N2C9 162 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 RNF175Q8N4F7 328 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 OR4F6Q8NGB9 312 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CNIH3Q8TBE1 160 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 VMP1Q96GC9 406 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 YME1L1Q96TA2 773 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 RHNO1Q9BSD3 238 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 OR2B2Q9GZK3 357 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 AMBNQ9NP70 447 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 KNL1Q8NG31 2342 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 MICAL3Q7RTP6 2002 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 F5H5T6 163 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 SEC22BO75396 215 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PRKD3O94806 890 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 GSTM2P28161 218 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PPP2R2BQ00005 443 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 IL5RAQ01344 420 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 BNIP2Q12982 314 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 AASDHQ4L235 1098 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 ATAD3CQ5T2N8 411 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 NADSYN1Q6IA69 706 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 GLB1LQ6UWU2 654 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PYCR2Q96C36 320 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 TSSK3Q96PN8 268 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 GPR63Q9BZJ6 419 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 IPPKQ9H8X2 491 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 RASSF1Q9NS23 344 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PKP3Q9Y446 797 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PCDHB3Q9Y5E6 796 aa12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-202ENST00000380281 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 C2orf81A6NN90 581 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 AP3D1O14617 1153 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 KERAO60938 352 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 ASGR1P07306 291 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 PKMP14618 531 aaKnown RBP12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 FMO3P31513 532 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 SLC6A4P31645 630 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 ARSFP54793 590 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 ARHGEF7Q14155 803 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 DGUOKQ16854 277 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms