RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 GRID2O43424 1007 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 CORO1AP31146 461 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 CLDN8P56748 225 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 PTGES3Q15185 160 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 TIGD2Q4W5G0 525 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 TMPRSS11AQ6ZMR5 421 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 PYROXD2Q8N2H3 581 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.16□□□□□ -1.26
VTA1-202ENST00000367630 SMYD1Q8NB12 490 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 PHF10Q8WUB8 498 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 HHIPL1Q96JK4 782 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 TBATAQ96M53 351 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 GABARAPL1Q9H0R8 117 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 CPA4Q9UI42 421 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 SCAF8Q9UPN6 1271 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 CAB39Q9Y376 341 aaPredicted RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 TSPAN19P0C672 248 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 PTBP1P26599 531 aaKnown RBP eCLIP7.16□□□□□ -1.262e-6■■■■□ 25.7
VTA1-202ENST00000367630 NFE2L1Q14494 772 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 SYPL2Q5VXT5 272 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 SERPINA9Q86WD7 417 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 PAPD5Q8NDF8 572 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 ADAM32Q8TC27 787 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 ELMO3Q96BJ8 720 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 DNAJC1Q96KC8 554 aaKnown RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 SAMD11Q96NU1 681 aa7.16□□□□□ -1.26
VTA1-202ENST00000367630 FCRL3Q96P31 734 aaPredicted RBP7.16□□□□□ -1.26
VTA1-202ENST00000367630 MAP3K6O95382 1288 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 TRBC1P01850 177 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 CKMP06732 381 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 DCKP27707 260 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 ARSFP54793 590 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 RAB14P61106 215 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 NKX3-2P78367 333 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 HEPACAMQ14CZ8 416 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 NEDD8Q15843 81 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 CNSTQ6PJW8 725 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SPESP1Q6UW49 350 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SATL1Q86VE3 508 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 CARM1Q86X55 608 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 TXNDC5Q8NBS9 432 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 CEP41Q9BYV8 373 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SEMA6AQ9H2E6 1030 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 MAN1C1Q9NR34 630 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 TESMINQ9Y4I5 508 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 E7ENX8 843 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 IFNGP01579 166 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 PITPNAQ00169 270 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 ECT2LQ008S8 904 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 IRF9Q00978 393 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SLC10A2Q12908 348 aaPredicted RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 RPA4Q13156 261 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 KIAA1614Q5VZ46 1190 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 BNIPLQ7Z465 357 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 TRAM1L1Q8N609 369 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 UBXN10Q96LJ8 280 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 FAIMQ9NVQ4 179 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 DUXAA6NLW8 204 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 AOC2O75106 756 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SLITRK5O94991 958 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SLC25A14O95258 325 aaPredicted RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 PGM3O95394 542 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 HMGN1P05114 100 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 PAICSP22234 425 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 NR4A1P22736 598 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 AP3S2P59780 193 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 RGS1Q08116 209 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 CARD16Q5EG05 197 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 PAOXQ6QHF9 649 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 OR4A15Q8NGL6 344 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 MCFD2Q8NI22 146 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 ZSCAN18Q8TBC5 510 aaPredicted RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 TEX47Q8TBZ9 253 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SPPL2AQ8TCT8 520 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 PXYLP1Q8TE99 480 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 LRCH3Q96II8 777 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 HERPUD2Q9BSE4 406 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 MND1Q9BWT6 205 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 RPF2Q9H7B2 306 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 POLR3BQ9NW08 1133 aaPredicted RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 MRPL39Q9NYK5 338 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 EXOSC1Q9Y3B2 195 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 ANKRD66B4E2M5 251 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 REM1O75628 298 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 CPSF4O95639 269 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 ENDOUP21128 410 aaKnown RBP7.15□□□□□ -1.26
VTA1-202ENST00000367630 KCNC4Q03721 635 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SCN1BQ07699 218 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 XKR6Q5GH73 641 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 FBXL22Q6P050 247 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 LARP4Q71RC2 724 aaKnown RBP eCLIP7.15□□□□□ -1.26
VTA1-202ENST00000367630 GOLGA7Q7Z5G4 137 aa7.15□□□□□ -1.26
VTA1-202ENST00000367630 SLCO6A1Q86UG4 719 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms