RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 APOLD1Q96LR9 279 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 TDRD1Q9BXT4 1180 aaKnown RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 CXorf56Q9H5V9 222 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 MAGEE1Q9HCI5 957 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SUV39H1O43463 412 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 AHSGP02765 367 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GPIP06744 558 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GTF2E2P29084 291 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GRIA1P42261 906 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 IDH3AP50213 366 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 MANFP55145 182 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 CDC42P60953 191 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SIM1P81133 766 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 ELOCQ15369 112 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SF1Q15637 639 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 FAAH2Q6GMR7 532 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 C22orf39Q6P5X5 142 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 C16orf62Q7Z3J2 963 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 PQLC1Q8N2U9 271 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 ZNF781Q8N8C0 355 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 MAPK15Q8TD08 544 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GSDMCQ9BYG8 508 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 DERL2Q9GZP9 239 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 MKS1Q9NXB0 559 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SUFUQ9UMX1 484 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 COPG1Q9Y678 874 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 BHMG1C9JSJ3 638 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 UBXN8O00124 270 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 OR10H2O60403 315 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 RNGTTO60942 597 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 FAM20BO75063 409 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SCELO95171 688 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 CAPN1P07384 714 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 ACP5P13686 325 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 JUNDP17535 347 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 ITPKAP23677 461 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 RANBP1P43487 201 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 CLK3P49761 638 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SEPHS1P49903 392 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 CCNHP51946 323 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 STC1P52823 247 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 DLG1Q12959 904 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 HEPACAMQ14CZ8 416 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 TMEM130Q8N3G9 435 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 C2orf73Q8N5S3 287 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GLIS1Q8NBF1 620 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 C2CD4AQ8NCU7 369 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 RASSF5Q8WWW0 418 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 KCNJ9Q92806 393 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 VMP1Q96GC9 406 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 LENG8Q96PV6 779 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SLC46A2Q9BY10 475 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 SLC29A3Q9BZD2 475 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 FZD3Q9NPG1 666 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 NLE1Q9NVX2 485 aaPredicted RBP6.9□□□□□ -1.31
RAB5B-201ENST00000360299 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 GPR34Q9UPC5 381 aa6.9□□□□□ -1.31
RAB5B-201ENST00000360299 OR2AG2A6NM03 316 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 C9J4A7 227 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 H3BN98 237 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PEX1O43933 1283 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ENTPD5O75356 428 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SH3BGRLO75368 114 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ZMPSTE24O75844 475 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PAK4O96013 591 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 BMP8BP34820 402 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 NEK2P51955 445 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RPS7P62081 194 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 ADAM15Q13444 863 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 DSC3Q14574 896 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 CCNYL2Q5T2Q4 361 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 DPY19L2P1Q6NXN4 242 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 EIF3MQ7L2H7 374 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 LRRC70Q7Z2Q7 622 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 FAM13CQ8NE31 585 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RAB7BQ96AH8 199 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RNF31Q96EP0 1072 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 TSSK3Q96PN8 268 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 SH3GL3Q99963 347 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 KATNBL1Q9H079 304 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 PRDM8Q9NQV8 689 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 MRTO4Q9UKD2 239 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 NFS1Q9Y697 457 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 RBBP6Q7Z6E9 1792 aaKnown RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 GFRA3O60609 400 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 GSRP00390 522 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 VAV1P15498 845 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 FOXN2P32314 431 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 GJA4P35212 333 aa6.89□□□□□ -1.31
RAB5B-201ENST00000360299 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
RAB5B-201ENST00000360299 STXBP1P61764 594 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms