RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ZNF225Q9UK10 706 aa18.21■□□□□ 0.51
PTN-201ENST00000348225 PCYT1BQ9Y5K3 369 aaPredicted RBP18.21■□□□□ 0.51
PTN-201ENST00000348225 KRBA1A5PL33 1030 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 DCXO43602 365 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 KCNJ13O60928 360 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 WDR47O94967 919 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 C1orf105O95561 183 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 EBLN1P0CF75 366 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 KELP23276 732 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 OXTRP30559 389 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 ADSLP30566 484 aaPredicted RBP18.2■□□□□ 0.5
PTN-201ENST00000348225 TRAF3Q13114 568 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 ANO7Q6IWH7 933 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 LETMD1Q6P1Q0 360 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 XKR5Q6UX68 686 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 FAM83HQ6ZRV2 1179 aaPredicted RBP18.2■□□□□ 0.5
PTN-201ENST00000348225 PDZD3Q86UT5 571 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 TREML1Q86YW5 311 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 GALNT13Q8IUC8 556 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CPSF7Q8N684 471 aaKnown RBP18.2■□□□□ 0.5
PTN-201ENST00000348225 CDYL2Q8N8U2 506 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 SNX31Q8N9S9 440 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 MYOCQ99972 504 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 NTMT1Q9BV86 223 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 TRPS1Q9UHF7 1281 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 FAM170BA6NMN3 283 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CEACAM5P06731 702 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 HGFP14210 728 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 HMOX2P30519 316 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 AKT2P31751 481 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 DMPKQ09013 629 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 PTCHD3Q3KNS1 767 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 METRNLQ641Q3 311 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 METTL6Q8TCB7 284 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CMTM5Q96DZ9 223 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CATSPER2Q96P56 530 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 CDK15Q96Q40 435 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 OR52A5Q9H2C5 316 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 LRMDAQ9H2I8 198 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 DNAJC11Q9NVH1 559 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 SLC23A2Q9UGH3 650 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 ACSL5Q9ULC5 683 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 TIMM22Q9Y584 194 aa18.2■□□□□ 0.5
PTN-201ENST00000348225 IFRD1O00458 451 aaPredicted RBP18.19■□□□□ 0.5
PTN-201ENST00000348225 RPN2P04844 631 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 CAPN1P07384 714 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 ACADLP28330 430 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 PRDX6P30041 224 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 CHSY3Q70JA7 882 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 LARP4Q71RC2 724 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTN-201ENST00000348225 ASRGL1Q7L266 308 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 KLHDC8AQ8IYD2 350 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 SIX5Q8N196 739 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
PTN-201ENST00000348225 MAGEB10Q96LZ2 347 aaPredicted RBP18.19■□□□□ 0.5
PTN-201ENST00000348225 PKP4Q99569 1192 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 TUBB1Q9H4B7 451 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 ZNF385DQ9H6B1 395 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 PRDM6Q9NQX0 595 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 RIC8BQ9NVN3 520 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 STOX2Q9P2F5 926 aaPredicted RBP18.19■□□□□ 0.5
PTN-201ENST00000348225 CYP8B1Q9UNU6 501 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 BTRCQ9Y297 605 aa18.19■□□□□ 0.5
PTN-201ENST00000348225 MYO1CO00159 1063 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 UBDO15205 165 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 LATO43561 262 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 ZNF217O75362 1048 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 SLC35G4P0C7Q5 338 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 HTR1BP28222 390 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 PTPN4P29074 926 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 CCR5P51681 352 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 MNAT1P51948 309 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 KLF10Q13118 480 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 NFATC4Q14934 902 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 TMEM31Q5JXX7 168 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 TMEM198Q66K66 360 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 AGTRAPQ6RW13 159 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 CHST15Q7LFX5 561 aaPredicted RBP18.18■□□□□ 0.5
PTN-201ENST00000348225 UBALD2Q8IYN6 164 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 DCBLD1Q8N8Z6 715 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 UHRF1Q96T88 793 aaPredicted RBP18.18■□□□□ 0.5
PTN-201ENST00000348225 SLC29A3Q9BZD2 475 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 FOXQ1Q9C009 403 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 ZDHHC5Q9C0B5 715 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 ATG10Q9H0Y0 220 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 ACTR8Q9H981 624 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 TM7SF3Q9NS93 570 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTN-201ENST00000348225 MOSPD1Q9UJG1 213 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 G3BP2Q9UN86 482 aaKnown RBP18.18■□□□□ 0.5
PTN-201ENST00000348225 ST14Q9Y5Y6 855 aa18.18■□□□□ 0.5
PTN-201ENST00000348225 ATP6AP2A0A1C7CYW4 349 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 POM121BA6NF01 834 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 H0YHG0 523 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 TOR1BO14657 336 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 ATP6AP2O75787 350 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 CLDN9O95484 217 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 LINC00032P0C843 101 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 ACP5P13686 325 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms