RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PITPNM3Q9BZ71 974 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 TWSG1Q9GZX9 223 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 C1GALT1Q9NS00 363 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 GEMIN8Q9NWZ8 242 aaKnown RBP13.98□□□□□ -0.17
HMGN3-202ENST00000344726 IL1RAPL1Q9NZN1 696 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 MED13Q9UHV7 2174 aa13.98□□□□□ -0.17
HMGN3-202ENST00000344726 ANKRD12Q6UB98 2062 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 GOLGA8MH3BSY2 632 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 J3QKU1 62 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 MATN2O00339 956 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 SLC28A2O43868 658 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 KIF5CO60282 957 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 NTRK1P04629 796 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 RPS3P23396 243 aaKnown RBP eCLIP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TUBB4BP68371 445 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TUBB2AQ13885 445 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TYSND1Q2T9J0 566 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 KIAA0930Q6ICG6 404 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 FAM199XQ6PEV8 388 aaPredicted RBP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TRIM73Q86UV7 250 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 SLC38A9Q8NBW4 561 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 MCUQ8NE86 351 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 CT55Q8WUE5 264 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 LPGAT1Q92604 370 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 STAMBPL1Q96FJ0 436 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 BIRC8Q96P09 236 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TRAPPC9Q96Q05 1148 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TUBB2BQ9BVA1 445 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 KLHL25Q9H0H3 589 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 SPHK1Q9NYA1 384 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 ACTR10Q9NZ32 417 aa13.97□□□□□ -0.17
HMGN3-202ENST00000344726 TDRKHQ9Y2W6 561 aaKnown RBP13.97□□□□□ -0.17
HMGN3-202ENST00000344726 HEATR5BQ9P2D3 2071 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 C2orf74A8MZ97 194 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 CES2O00748 559 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 NDUFS3O75489 264 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 F7P08709 466 aaPredicted RBP13.96□□□□□ -0.17
HMGN3-202ENST00000344726 PEBP1P30086 187 aaKnown RBP13.96□□□□□ -0.17
HMGN3-202ENST00000344726 MAGEA3P43357 314 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 FNTAP49354 379 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.17
HMGN3-202ENST00000344726 SARNPP82979 210 aaKnown RBP13.96□□□□□ -0.17
HMGN3-202ENST00000344726 ABRQ12979 859 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 KCNAB2Q13303 367 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 GRB7Q14451 532 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 DEFB109BQ30KR1 87 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 ZNF789Q5FWF6 425 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 PTRHD1Q6GMV3 140 aaKnown RBP13.96□□□□□ -0.17
HMGN3-202ENST00000344726 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 SPESP1Q6UW49 350 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 PRICKLE2Q7Z3G6 844 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 OTUD6BQ8N6M0 293 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 LMNTD1Q8N9Z9 388 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 FCRL4Q96PJ5 515 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 OR2A14Q96R47 310 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 MENTQ9BUN1 341 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 EFHD1Q9BUP0 239 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 TRIM4Q9C037 500 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 SLC25A18Q9H1K4 315 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 LHX9Q9NQ69 397 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 CIDEBQ9UHD4 219 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 POLG2Q9UHN1 485 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 GNPTGQ9UJJ9 305 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 PYCARDQ9ULZ3 195 aa13.96□□□□□ -0.17
HMGN3-202ENST00000344726 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 F8W8V4 182 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 SUV39H1O43463 412 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 APOA4P06727 396 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CHRM5P08912 532 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 MLNP12872 115 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 UGT2B7P16662 529 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 TCN2P20062 427 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 FMO4P31512 558 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 SHMT2P34897 504 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CCR10P46092 362 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 DNASE1L3Q13609 305 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 ERV3-1Q14264 604 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 ZIC1Q15915 447 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 ANKRD20A4Q4UJ75 823 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CRTC2Q53ET0 693 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 TMTC4Q5T4D3 741 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 LCN10Q6JVE6 187 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CASC4Q6P4E1 433 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CENPUQ71F23 418 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 BPHLQ86WA6 291 aaPredicted RBP13.95□□□□□ -0.18
HMGN3-202ENST00000344726 LINC01555Q8NAE3 123 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 OR1L3Q8NH93 324 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 CFAP61Q8NHU2 1237 aa13.95□□□□□ -0.18
HMGN3-202ENST00000344726 SIGLEC10Q96LC7 697 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms