RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GDPD1Q8N9F7 314 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 KCT2Q8NC54 265 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 OR8H1Q8NGG4 311 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 C9orf43Q8TAL5 461 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 UBASH3BQ8TF42 649 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TWIST2Q8WVJ9 160 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF775Q96BV0 537 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MOCOSQ96EN8 888 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PDXPQ96GD0 296 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MSANTD3Q96H12 275 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CRELD1Q96HD1 420 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 GUCD1Q96NT3 240 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 DCLRE1CQ96SD1 692 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 VAT1Q99536 393 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 NUSAP1Q9BXS6 441 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ACTR8Q9H981 624 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CYP3A43Q9HB55 503 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ACSS2Q9NR19 701 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SMPD4Q9NXE4 827 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TAS2R7Q9NYW3 318 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ELF5Q9UKW6 265 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MFHAS1Q9Y4C4 1052 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 HSPB11Q9Y547 144 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PCDHB5Q9Y5E4 795 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PTCH2Q9Y6C5 1203 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 COL1A2P08123 1366 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 BRCA2P51587 3418 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZFC3H1O60293 1989 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 LINC00854A0A1B0GVQ3 168 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FAM234BA2RU67 622 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SLC35F4A4IF30 521 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FAM170BA6NMN3 283 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 YDJCA8MPS7 323 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 AZIN1O14977 448 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SSX4O60224 188 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF254O75437 659 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 RFPL3O75679 317 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SLC22A3O75751 556 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 RECQL5O94762 991 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 IFNA7P01567 189 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CCNYL3P0C7X3 344 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CYP2C8P10632 490 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 HOXD8P13378 290 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 HGFP14210 728 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PTX3P26022 381 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 HMGCLP35914 325 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SCNN1AP37088 669 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 DCTP40126 519 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 GBX2P52951 348 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 AP1S2P56377 157 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 RAB14P61106 215 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PURAQ00577 322 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MXD4Q14582 209 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 MAD2L1BPQ15013 274 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CLLU1Q5K131 121 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 KANK2Q63ZY3 851 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FAM109BQ6ICB4 259 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SHQ1Q6PI26 577 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PLET1Q6UQ28 207 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PID1Q7Z2X4 250 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 P3H2Q8IVL5 708 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF567Q8N184 647 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 NAT16Q8N8M0 369 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FAM181AQ8N9Y4 354 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 OR7G3Q8NG95 312 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 OR4M1Q8NGD0 313 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 HEXDCQ8WVB3 486 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 UFD1Q92890 307 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZC3HAV1LQ96H79 300 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TMEM176AQ96HP8 235 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 OPALINQ96PE5 141 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PPP1R2P1Q96PQ5 205 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 SDHCQ99643 169 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 OMDQ99983 421 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 CEP41Q9BYV8 373 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 BRINP2Q9C0B6 783 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 FBRSL1Q9HCM7 1045 aaKnown RBP7.97□□□□□ -1.13
ATG4A-201ENST00000343524 AIG1Q9NVV5 245 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 C14orf119Q9NWQ9 140 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF224Q9NZL3 707 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 GMEB2Q9UKD1 530 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 ACSL5Q9ULC5 683 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 PCDHA10Q9Y5I2 948 aa7.97□□□□□ -1.13
ATG4A-201ENST00000343524 TTC28Q96AY4 2481 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.13
ATG4A-201ENST00000343524 EFCAB10A6NFE3 127 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 WASH4PA8MWX3 477 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 A8MX80 341 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 B4DXG7 233 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 AP3D1O14617 1153 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 YKT6O15498 198 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 RGS5O15539 181 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 SEC14L5O43304 696 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 PI15O43692 258 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 ATG13O75143 517 aa7.96□□□□□ -1.13
ATG4A-201ENST00000343524 CYP7B1O75881 506 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms