RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ATG16L2Q8NAA4 619 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 HPS1Q92902 700 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 OLA1Q9NTK5 396 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 MTRRQ9UBK8 725 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 C3orf18Q9UK00 162 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.1□□□□□ -0.155e-8■■■■■ 34.6
CPSF7-201ENST00000340437 TRIM64CA6NLI5 447 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF701M0R085 212 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SLC1A7O00341 560 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PER2O15055 1255 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SEC14L2O76054 403 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 HTR1AP08908 422 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF12P17014 697 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 S100A3P33764 101 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 DCTP40126 519 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 NCS1P62166 190 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 HSPA14Q0VDF9 509 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SYT16Q17RD7 645 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 DOK6Q6PKX4 331 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF621Q6ZSS3 439 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 TAS1R1Q7RTX1 841 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZCCHC7Q8N3Z6 543 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PSMA8Q8TAA3 256 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SELENOMQ8WWX9 145 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PPP3R2Q96LZ3 170 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 RBM4BQ9BQ04 359 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 RBM4Q9BWF3 364 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 FAM126AQ9BYI3 521 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 KLHL25Q9H0H3 589 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PAK1IP1Q9NWT1 392 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 GABRQQ9UN88 632 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 MTMR11A4FU01 709 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 NTRK1P04629 796 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 RGS4P49798 205 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 SEPHS1P49903 392 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZXDBP98169 803 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 NPTX1Q15818 432 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 INAQ16352 499 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 DPY19L1Q2PZI1 675 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PAGE2Q7Z2X7 111 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 LEMD2Q8NC56 503 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 PAPD5Q8NDF8 572 aaKnown RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 TSPEARQ8WU66 669 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 APOLD1Q96LR9 279 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 UROC1Q96N76 676 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF451Q9Y4E5 1061 aa14.1□□□□□ -0.15
CPSF7-201ENST00000340437 ARIH1Q9Y4X5 557 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-201ENST00000340437 CLDN7O95471 211 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 KLKB1P03952 638 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 PORP16435 677 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 MSH3P20585 1137 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 IGFBP5P24593 272 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 VTCN1Q7Z7D3 282 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ADGRG2Q8IZP9 1017 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 GOLM1Q8NBJ4 401 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 PDPRQ8NCN5 879 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 DPH2Q9BQC3 489 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 OSBPL10Q9BXB5 764 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 TNKS2Q9H2K2 1166 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 PDFQ9HBH1 243 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ABCB10Q9NRK6 738 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ARL15Q9NXU5 204 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 A8MU76 341 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 CLDN25C9JDP6 229 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ADAM12O43184 909 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 FAM20BO75063 409 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ITPKAP23677 461 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 TACR1P25103 407 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 EPHA2P29317 976 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 CD97P48960 835 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 EMX1Q04741 257 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 MGAT3Q09327 533 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 RTP2Q5QGT7 225 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ADAMTSL2Q86TH1 951 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 MICU2Q8IYU8 434 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 HTRA1Q92743 480 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 TBCCD1Q9NVR7 557 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 NUDT4Q9NZJ9 180 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 DLGAP4Q9Y2H0 992 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 UNCXA6NJT0 531 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF99A8MXY4 864 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ADAM23O75077 832 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 OAZ2O95190 189 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF7P17097 686 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 PTGER3P43115 390 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 RBM48Q5RL73 367 aaKnown RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 OR4F3Q6IEY1 312 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 SBSNQ6UWP8 590 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 AHSA2Q719I0 299 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 ZNF548Q8NEK5 533 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 KCNJ9Q92806 393 aa14.09□□□□□ -0.15
CPSF7-201ENST00000340437 SH3YL1Q96HL8 342 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-201ENST00000340437 BBS2Q9BXC9 721 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms