RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 MARCH9Q86YJ5 346 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 THRSPQ92748 146 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LENG9Q96B70 501 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TUBB1Q9H4B7 451 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C1orf109Q9NX04 203 aa12.56□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FOXD2O60548 495 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 IFNA21P01568 189 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GNPDA1P46926 289 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PPIL2Q13356 520 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GTF2H2Q13888 395 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GTF2H2CQ6P1K8 395 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF529Q6P280 563 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ARHGAP12Q8IWW6 846 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CD93Q9NPY3 652 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FGF10O15520 208 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CYP11A1P05108 521 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HOXC8P31273 242 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HSPA7P48741 367 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NUDT6P53370 316 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DSG2Q14126 1118 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 THG1LQ9NWX6 298 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 WASH3PC4AMC7 463 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NR4A2P43354 598 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 KLHL22Q53GT1 634 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MFSD14AQ96MC6 490 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PPP4R1LQ9P1A2 415 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HCN3Q9P1Z3 774 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 INPPL1O15357 1258 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 IL32P24001 234 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 XKP51811 444 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TGFBIQ15582 683 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NT5DC1Q5TFE4 455 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 KCT2Q8NC54 265 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 IMP3Q9NV31 184 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 METP08581 1390 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OTOL1A6NHN0 477 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DFNA5O60443 496 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CYB5AP00167 134 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ALAS2P22557 587 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LAPTM5Q13571 262 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PTGR1Q14914 329 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZACNQ401N2 412 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SYVN1Q86TM6 617 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TREX2Q9BQ50 279 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC30A2Q9BRI3 323 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 E9PI62 339 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ADAMDEC1O15204 470 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C2P06681 752 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF823P16415 610 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RAB4BP61018 213 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GALNT1Q10472 559 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ALG10Q5BKT4 473 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GALNT7Q86SF2 657 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TMEM192Q8IY95 271 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC22A15Q8IZD6 547 aa12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRDM15P57071 1507 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FRMPD4Q14CM0 1322 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLITRK3O94933 977 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GBX2P52951 348 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HTRA4P83105 476 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GCNT1Q02742 428 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC44A1Q8WWI5 657 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TGIF2Q9GZN2 237 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LYARQ9NX58 379 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FBXW2Q9UKT8 454 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 J3QLW9 94 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PAEPP09466 180 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 COL6A2P12110 1019 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF19P17023 458 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 XRCC1P18887 633 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 E2F1Q01094 437 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RHDQ02161 417 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GRIK4Q16099 956 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC15A3Q8IY34 581 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MUC13Q9H3R2 512 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZBED5Q49AG3 693 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OTOP3Q7RTS5 596 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 KLHL36Q8N4N3 616 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ELOVL4Q9GZR5 314 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCDHB9Q9Y5E1 797 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms