RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NRP2O60462 931 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 KRT36O76013 467 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 KLF8O95600 359 aaPredicted RBP21.73■■□□□ 1.07
SMAD1-201ENST00000302085 COL9A1P20849 921 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 BDKRB1P46663 353 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 PFN3P60673 137 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 IRX1P78414 480 aaPredicted RBP21.73■■□□□ 1.07
SMAD1-201ENST00000302085 FGL2Q14314 439 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 ATP6AP1LQ52LC2 224 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 SDE2Q6IQ49 451 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 CRTC3Q6UUV7 619 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 HEATR4Q86WZ0 1026 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 SLC45A3Q96JT2 553 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 LGR4Q9BXB1 951 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 DCLRE1BQ9H816 532 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 MBNL1Q9NR56 388 aaKnown RBP21.73■■□□□ 1.07
SMAD1-201ENST00000302085 HEBP1Q9NRV9 189 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 FBXL12Q9NXK8 326 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 NDE1Q9NXR1 346 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 KLQ9UEF7 1012 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 PACSIN3Q9UKS6 424 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 F5P12259 2224 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 TRPM6Q9BX84 2022 aa21.73■■□□□ 1.07
SMAD1-201ENST00000302085 A0A1W2PQF6 199 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 LSM1O15116 133 aaKnown RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PSMG1O95456 288 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 LMNAP02545 664 aaKnown RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 ITPKAP23677 461 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 AGERQ15109 404 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 MMEL1Q495T6 779 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 RNF165Q6ZSG1 346 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 C11orf96Q7Z7L8 435 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 CCDC138Q96M89 665 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PKP4Q99569 1192 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 SLC29A3Q9BZD2 475 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 ACTR8Q9H981 624 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 TRPV5Q9NQA5 729 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 DNAJC11Q9NVH1 559 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PIAS3Q9Y6X2 628 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 ZFC3H1O60293 1989 aaKnown RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 C17orf113A0A1B0GUU1 675 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PRAMEF4O60810 478 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 ULK1O75385 1050 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 CATP04040 527 aaKnown RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 CDK3Q00526 305 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 GRIK2Q13002 908 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 IER5LQ5T953 404 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PRAMEF9Q5VWM5 478 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 BNC2Q6ZN30 1099 aaPredicted RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 RALGPS2Q86X27 583 aaPredicted RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 MYLK4Q86YV6 388 aaPredicted RBP21.72■■□□□ 1.07
SMAD1-201ENST00000302085 SLC44A3Q8N4M1 653 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 FNDC5Q8NAU1 212 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 KCNV2Q8TDN2 545 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 GANCQ8TET4 914 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 TEX37Q96LM6 180 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 BRINP2Q9C0B6 783 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 SLC52A3Q9NQ40 469 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 LIMD1Q9UGP4 676 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 CIDEBQ9UHD4 219 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 POMPQ9Y244 141 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PRKAB1Q9Y478 270 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 PCDHGA7Q9Y5G6 932 aa21.72■■□□□ 1.07
SMAD1-201ENST00000302085 KCNE1BA0A087WTH5 132 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 C9JVG2 144 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 NR5A2O00482 541 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 EMX2Q04743 252 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 STARD3Q14849 445 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 SLC44A4Q53GD3 710 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 SGO1Q5FBB7 561 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 DOK6Q6PKX4 331 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 RETREG3Q86VR2 466 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 OR2L2Q8NH16 312 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 USP7Q93009 1102 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 FAM131CQ96AQ9 280 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 FOPNLQ96NB1 174 aa21.71■■□□□ 1.07
SMAD1-201ENST00000302085 STOX2Q9P2F5 926 aaPredicted RBP21.71■■□□□ 1.07
SMAD1-201ENST00000302085 ZNF490Q9ULM2 529 aaPredicted RBP21.71■■□□□ 1.07
SMAD1-201ENST00000302085 MGAT4DA6NG13 374 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 MRASO14807 208 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 MAPK9P45984 424 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 ZFP36L2P47974 494 aaKnown RBP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 PSME3P61289 254 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 NR6A1Q15406 480 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 CPSF6Q16630 551 aaKnown RBP eCLIP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 AP5B1Q2VPB7 878 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 PLA2G4EQ3MJ16 856 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 VPS26BQ4G0F5 336 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 PDCD4Q53EL6 469 aaKnown RBP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 PIGGQ5H8A4 983 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 BLOC1S3Q6QNY0 202 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 AGTRAPQ6RW13 159 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 FAM83HQ6ZRV2 1179 aaPredicted RBP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 TRIM46Q7Z4K8 759 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 L3MBTL4Q8NA19 623 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 KLK6Q92876 244 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 CCDC124Q96CT7 223 aaKnown RBP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 KCNK12Q9HB15 430 aa21.7■■□□□ 1.07
SMAD1-201ENST00000302085 INTS7Q9NVH2 962 aaKnown RBP21.7■■□□□ 1.07
SMAD1-201ENST00000302085 COL4A2P08572 1712 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms