RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PAGE1O75459 146 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CREG1O75629 220 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 GLP2RO95838 553 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ATXN1LP0C7T5 689 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 HK3P52790 923 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF45Q02386 682 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 SLC10A7Q0GE19 358 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ZFP69Q49AA0 526 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 RFTN2Q52LD8 501 aaPredicted RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ZCCHC8Q6NZY4 707 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 EFL1Q7Z2Z2 1120 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 UBQLNLQ8IYU4 475 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 PPP1R13LQ8WUF5 828 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 APH1BQ8WW43 257 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 C1QTNF3Q9BXJ4 246 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 DERL2Q9GZP9 239 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TRMT13Q9NUP7 481 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ABCG2Q9UNQ0 655 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TIMM13Q9Y5L4 95 aaPredicted RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 A0A096LPI6 279 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 UBA6A0AVT1 1052 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 J3KR12 359 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 BTN3A1O00481 513 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 E2F3O00716 465 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 PCDHGA12O60330 932 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 SEMA3DO95025 777 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 MLYCDO95822 493 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 PIRTP0C851 137 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 MSH3P20585 1137 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 C21orf33P30042 268 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 PPP3CCP48454 512 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NR6A1Q15406 480 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 AFMIDQ63HM1 303 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 SIGIRRQ6IA17 410 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TIGD7Q6NT04 549 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ZNF544Q6NX49 715 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 GALNT12Q8IXK2 581 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 DNASE1L2Q92874 299 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TTYH2Q9BSA4 534 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 POPDC3Q9HBV1 291 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 CCNB1IP1Q9NPC3 277 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 UXTQ9UBK9 157 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NDRG4Q9ULP0 352 aaKnown RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TBKBP1A7MCY6 615 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 H3BQ06 376 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ERVH48-1M5A8F1 160 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 STX16O14662 325 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 RHOBTB1O94844 696 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 SCELO95171 688 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 RETP07949 1114 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NAT1P18440 290 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 EFNA1P20827 205 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 CTSKP43235 329 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 FAM174BQ3ZCQ3 159 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 BCL7AQ4VC05 210 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 Q5BKY6 102 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 KDM4DQ6B0I6 523 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NOTUMQ6P988 496 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 IL27RAQ6UWB1 636 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 GCNT7Q6ZNI0 430 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 OR56A4Q8NGH8 313 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 OR52E4Q8NGH9 312 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 HCAR2Q8TDS4 363 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 EGLN2Q96KS0 407 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 FCRL2Q96LA5 508 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 Q96MT0 163 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NEDD4LQ96PU5 975 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 DEPDC7Q96QD5 511 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 OSMRQ99650 979 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TM9SF3Q9HD45 589 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TMEM45AQ9NWC5 275 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 EHD3Q9NZN3 535 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NPAP1Q9NZP6 1156 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 LCHNA4D1U4 455 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 KLK8O60259 260 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 RECQL5O94762 991 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 DIRAS1O95057 198 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 CAPN1P07384 714 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ABCB1P08183 1280 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 FMO4P31512 558 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 STC1P52823 247 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 GNG2P59768 71 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 CREMQ03060 361 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ACVR1Q04771 509 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 MFSD10Q14728 455 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 PGBD5Q8N414 524 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 AMER2Q8N7J2 671 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 TTC29Q8NA56 475 aaPredicted RBP10.66□□□□□ -0.7
ZNF558-201ENST00000301475 BLOC1S5Q8TDH9 187 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 CDCA5Q96FF9 252 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 ARPC5LQ9BPX5 153 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 NUAK2Q9H093 628 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 GABARAPL1Q9H0R8 117 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 MAGIXQ9H6Y5 334 aa10.66□□□□□ -0.7
ZNF558-201ENST00000301475 SP110Q9HB58 689 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms