RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 PCNPQ8WW12 178 aaKnown RBP14.59□□□□□ -0.07
SPIDR-201ENST00000297423 PHF21AQ96BD5 680 aa14.59□□□□□ -0.07
SPIDR-201ENST00000297423 KCNC2Q96PR1 638 aa14.59□□□□□ -0.07
SPIDR-201ENST00000297423 MAT2BQ9NZL9 334 aa14.59□□□□□ -0.07
SPIDR-201ENST00000297423 UXTQ9UBK9 157 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-201ENST00000297423 IKZF3Q9UKT9 509 aa14.59□□□□□ -0.07
SPIDR-201ENST00000297423 PCDHA9Q9Y5H5 950 aa14.59□□□□□ -0.07
SPIDR-201ENST00000297423 SMIM28A0A1B0GU29 152 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.07
SPIDR-201ENST00000297423 TARM1B6A8C7 271 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 CTDSP2O14595 271 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 NTRK1P04629 796 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 ARNTP27540 789 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 EEFSECP57772 596 aaKnown RBP14.58□□□□□ -0.07
SPIDR-201ENST00000297423 PAFAH1B3Q15102 231 aaKnown RBP14.58□□□□□ -0.07
SPIDR-201ENST00000297423 ZDHHC21Q8IVQ6 265 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 TMEM199Q8N511 208 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 TUBB1Q9H4B7 451 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 UCKL1Q9NWZ5 548 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 PRKAB1Q9Y478 270 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 ARL5AQ9Y689 179 aa14.58□□□□□ -0.07
SPIDR-201ENST00000297423 HOXC11O43248 304 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-201ENST00000297423 HTR1AP08908 422 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 ATF4P18848 351 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-201ENST00000297423 GRIK1P39086 918 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 TSTA3Q13630 321 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-201ENST00000297423 CACHD1Q5VU97 1274 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 GPRIN3Q6ZVF9 776 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 STAG3L4Q8TBR4 150 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 SLC39A8Q9C0K1 460 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 OR51E2Q9H255 320 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 SP140LQ9H930 580 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 CPNE5Q9HCH3 593 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 TAS2R9Q9NYW1 312 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 MSH3P20585 1137 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 MASP1P48740 699 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 INCA1Q0VD86 236 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 PTPRNQ16849 979 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 NRARPQ7Z6K4 114 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 C2CD4AQ8NCU7 369 aaPredicted RBP14.58□□□□□ -0.08
SPIDR-201ENST00000297423 SPPL2AQ8TCT8 520 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 TSSK3Q96PN8 268 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 OR52E6Q96RD3 313 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 FHP07954 510 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 CDH24Q86UP0 819 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 PARP16Q8N5Y8 322 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 LRRC52Q8N7C0 313 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 NEDD4LQ96PU5 975 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 GPR21Q99679 349 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 CNPPD1Q9BV87 410 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 NTN4Q9HB63 628 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 C8orf4Q9NR00 106 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 RABL2BQ9UNT1 228 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 RNF6Q9Y252 685 aa14.58□□□□□ -0.08
SPIDR-201ENST00000297423 SAGE2PA6NJ88 616 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 TULP3O75386 442 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 HACD2Q6Y1H2 254 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CYP4Z1Q86W10 505 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 ATP6V0D2Q8N8Y2 350 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 FYTTD1Q96QD9 318 aaKnown RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 SDR39U1Q9NRG7 319 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 TSPAN4O14817 238 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 TMCC2O75069 709 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 SCO1O75880 301 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 HTR6P50406 440 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CYP4F8P98187 520 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 KRR1Q13601 381 aaKnown RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 DDX39BQ13838 428 aaKnown RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 TYSND1Q2T9J0 566 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 C9orf57Q5W0N0 161 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 KLHL17Q6TDP4 642 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 MFSD4AQ8N468 514 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 OR56A4Q8NGH8 313 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 PTCD2Q8WV60 388 aaKnown RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CCDC120Q96HB5 630 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 OR2B2Q9GZK3 357 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 VAPAQ9P0L0 249 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 RCOR3Q9P2K3 495 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 NME7Q9Y5B8 376 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 FAM172BPA6NC97 362 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 UPK3BL1B0FP48 263 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 UPK3BL2E5RIL1 263 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CD3EAPO15446 510 aaKnown RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 SNX4O95219 450 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CREB5Q02930 508 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 IL18R1Q13478 541 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 C18orf21Q32NC0 220 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 CES5AQ6NT32 575 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 TMEM207Q6UWW9 146 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 GDPD3Q7L5L3 318 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 MIB1Q86YT6 1006 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 SLC44A2Q8IWA5 706 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 OR52B6Q8NGF0 335 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 ENKURQ8TC29 256 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 ISL2Q96A47 359 aa14.57□□□□□ -0.08
SPIDR-201ENST00000297423 RANGRFQ9HD47 186 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-201ENST00000297423 SCUBE2Q9NQ36 999 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms