RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 H3BMQ9 156 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SLC28A1O00337 649 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 OR7A17O14581 309 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 FFAR2O15552 330 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 RGS14O43566 566 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 FZD6O60353 706 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 NOL3O60936 208 aaKnown RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 IL6P05231 212 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 THRBP10828 461 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF7P17097 686 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 AKT1P31749 480 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 KIAA0040Q15053 153 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 NR6A1Q15406 480 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF829Q3KNS6 432 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TBC1D25Q3MII6 688 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ADGRF1Q5T601 910 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SLC8B1Q6J4K2 584 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TTC23LQ6PF05 361 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 KLHL35Q6PF15 583 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SCIMPQ6UWF3 145 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SBSNQ6UWP8 590 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 GRASPQ7Z6J2 395 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ZDHHC13Q8IUH4 622 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SVOPLQ8N434 492 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 OR4F6Q8NGB9 312 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 MIPOL1Q8TD10 442 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SDCCAG3Q96C92 435 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 THAP11Q96EK4 314 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 MAGED4Q96JG8 741 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 COG8Q96MW5 612 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 HPS4Q9NQG7 708 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 IFT80Q9P2H3 777 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 DNAJB9Q9UBS3 223 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 CDC14AQ9UNH5 594 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ASB1Q9Y576 335 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ACTL7AQ9Y615 435 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TECTAO75443 2155 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 DENND4AQ7Z401 1863 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF840PA6NDX5 716 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 CBX4O00257 560 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 DNAJB5O75953 348 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 IL1RNP18510 177 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ATF6P18850 670 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
C9orf3-201ENST00000277198 CTBSQ01459 385 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TRAF2Q12933 501 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TRAF3Q13114 568 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 BROXQ5VW32 411 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 LYPLAL1Q5VWZ2 237 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 CCDC149Q6ZUS6 474 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 TAS2R42Q7RTR8 314 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 THAP5Q7Z6K1 395 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 MILR1Q7Z6M3 343 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 DENND1CQ8IV53 801 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 OR13F1Q8NGS4 319 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 GIPC2Q8TF65 315 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 SLC13A3Q8WWT9 602 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 EXOC2Q96KP1 924 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 ZNF583Q96ND8 569 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 MYADMQ96S97 322 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 OARD1Q9Y530 152 aa12.65□□□□□ -0.38
C9orf3-201ENST00000277198 H0Y858 1186 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 SCELO95171 688 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 CLIC3O95833 236 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 DGKAP23743 735 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 ARF5P84085 180 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 TRIM46Q7Z4K8 759 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 OR2T12Q8NG77 320 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 UBTD2Q8WUN7 234 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 HDAC2Q92769 488 aaKnown RBP12.64□□□□□ -0.39
C9orf3-201ENST00000277198 BORCS5Q969J3 196 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 TMBIM1Q969X1 311 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 ESAMQ96AP7 390 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 PPM1MQ96MI6 270 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 FAM126AQ9BYI3 521 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-201ENST00000277198 MAGIXQ9H6Y5 334 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 IPPKQ9H8X2 491 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 STOML2Q9UJZ1 356 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
C9orf3-201ENST00000277198 MTCL1Q9Y4B5 1905 aaKnown RBP12.64□□□□□ -0.39
C9orf3-201ENST00000277198 G3V2T6 193 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 SEC14L2O76054 403 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ABLIM3O94929 683 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 ATE1O95260 518 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 LATS1O95835 1130 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GALK1P51570 392 aa12.63□□□□□ -0.39
C9orf3-201ENST00000277198 GABARAPL2P60520 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms