RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 RPL3P39023 403 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 MAPK8P45983 427 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 GATMP50440 423 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 VLDLRP98155 873 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 DCAKDQ8WVC6 231 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TAMM41Q96BW9 452 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 TMEM27Q9HBJ8 222 aa13.38□□□□□ -0.27
TGFBR3-201ENST00000212355 APODP05090 189 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 KCNA5P22460 613 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 NFATC2Q13469 925 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 E2F2Q14209 437 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 KLK1P06870 262 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 IL7RP16871 459 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 DAOAP59103 153 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 UFM1P61960 85 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 BNIP3Q12983 259 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 OR2L3Q8NG85 312 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 TTYH2Q9BSA4 534 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 OSBPL2Q9H1P3 480 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 AKAP7Q9P0M2 348 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 PCDHGC3Q9UN70 934 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 EFCAB9A8MZ26 197 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 H3BSA7 217 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 BCAP31P51572 246 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 LARS2Q15031 903 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 OR4F3Q6IEY1 312 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 FRMD7Q6ZUT3 714 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 CENPNQ96H22 339 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 TAS2R1Q9NYW7 299 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 RSL1D1O76021 490 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 HDDC3Q8N4P3 179 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 METTL27Q8N6F8 245 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 B3GNT4Q9C0J1 378 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 PCDHB1Q9Y5F3 818 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 RIIAD1A6NNX1 92 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 PSMA1P25786 263 aaKnown RBP13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 LCN1P1Q5VSP4 162 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 GALNT15Q8N3T1 639 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 GPR151Q8TDV0 419 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 CANT1Q8WVQ1 401 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 PKP2Q99959 881 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 PIGVQ9NUD9 493 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 IRAK3Q9Y616 596 aa13.37□□□□□ -0.27
TGFBR3-201ENST00000212355 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SYN1P17600 705 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 MASP1P48740 699 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 OGDHQ02218 1023 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 TNFAIP8L1Q8WVP5 186 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ECI2O75521 394 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ATF4P18848 351 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 PPP1R3AQ16821 1122 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC24A5Q71RS6 500 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CAND1Q86VP6 1230 aaKnown RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 A0A1B0GVT2 93 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CDC7O00311 574 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 MEF2AQ02078 507 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SNX20Q7Z614 316 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CCDC28BQ9BUN5 200 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 CDH4P55283 916 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SCARB2Q14108 478 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ZZZ3Q8IYH5 903 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 HSPBAP1Q96EW2 488 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 PRDM16Q9HAZ2 1276 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 TMEM98Q9Y2Y6 226 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 PTGDR2Q9Y5Y4 395 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 FKBP7Q9Y680 259 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 ATRNO75882 1429 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 GLOD5A6NK44 160 aa13.36□□□□□ -0.27
TGFBR3-201ENST00000212355 SLC30A4O14863 429 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms