RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Gm5415E9PXF3 478 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Slc22a8O88909 537 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Impdh2P24547 514 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Mapkapk2P49138 386 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Hsd17b4P51660 735 aaKnown RBP17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Psme2P97372 239 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 CkbQ04447 381 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gjc2Q8BQU6 440 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Lpcat2Q8BYI6 544 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Vmn1r6Q8R2D4 303 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Lsm1Q8VC85 133 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tcam1Q99NB3 548 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tmbim6Q9D2C7 237 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 CtsrQ9JIA9 334 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Oaz3Q9R109 243 aa17.47■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gm14781A2A9Q9 366 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Fam166bA2AIP0 273 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gm10718D3Z1I7 227 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Ptger4P32240 513 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Btbd1P58544 488 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Hyal4Q05A56 481 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Mageb5Q14AN0 366 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Kctd21Q3URF8 260 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Olfr381Q5SSP0 311 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Znrf3Q5SSZ7 913 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Kmt5cQ6Q783 468 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Clec7aQ6QLQ4 244 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Olfr538Q7TRT5 310 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 H2-M10.2Q85ZW9 329 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Fut11Q8BHC9 489 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tmem214Q8BM55 687 aaKnown RBP17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Phtf2Q8CB19 747 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tmem203Q8R235 136 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Olfr1208Q8VG47 308 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 AclyQ91V92 1091 aaKnown RBP17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Smap1Q91VZ6 440 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Cers2Q924Z4 380 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Plpp3Q99JY8 312 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Cyp4f3Q99N16 524 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 XpotQ9CRT8 963 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Ola1Q9CZ30 396 aaKnown RBP17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tomm70Q9CZW5 611 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Spatc1lQ9D9W0 342 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gm13128L7MU96 475 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Aff2O55112 1272 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Cdh1P09803 884 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Oas1aP11928 367 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 SrgnP13609 152 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 CskP41241 450 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Tuba4aP68368 448 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gjb5Q02739 271 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Lingo4Q149C3 593 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Hephl1Q3V1H3 1159 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Dsg1bQ7TSF1 1060 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Gpr139Q80UC8 345 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 AftphQ80WT5 931 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Arhgap12Q8C0D4 838 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Samd3Q8C4H2 520 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Oas1gQ8K469 367 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Vmn1r38Q8R2E1 302 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Ptgr2Q8VDQ1 351 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Zfp773Q9CZ29 471 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Fundc2Q9D6K8 151 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Glod5Q9D8I3 148 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Maged1Q9QYH6 775 aaKnown RBP17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 RgrQ9Z2B3 291 aa17.46■□□□□ 0.39
Ptpra-201ENSMUST00000028769 Kiaa0100Q5SYL3 2234 aa17.46■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Gm19965J3QNY8 723 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Cxcr3O88410 367 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Sp1O89090 784 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Cyp21P03940 487 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 ApoeP08226 311 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Hoxa9P09631 271 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 C1qbP14106 253 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Cd247P24161 164 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Drd4P51436 387 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Fam71bQ5STT6 665 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Znf366Q6NS86 746 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Olfr1313Q7TQW8 311 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Trnau1apQ80VC6 287 aaKnown RBP17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 C2cd4bQ80XU5 340 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Bcas1Q80YN3 633 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Cpsf4Q8BQZ5 211 aaKnown RBP17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Mcm8Q9CWV1 833 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Nos1apQ9D3A8 503 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Ovca2Q9D7E3 225 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 ArntlQ9WTL8 632 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Ifi213D3Z5G0 586 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Speer4cG3UXD1 256 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Gm10354K7N6A0 256 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Vmn2r31L7N1Z4 861 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Pou1f1Q00286 291 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Pfdn6Q03958 127 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 March5Q3KNM2 278 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Trappc9Q3U0M1 1148 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Sec24dQ6NXL1 1032 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 BtdQ8CIF4 520 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Serpinb11Q9CQV3 388 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Thap11Q9JJD0 305 aa17.45■□□□□ 0.38
Ptpra-201ENSMUST00000028769 Sae1Q9R1T2 350 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms