RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 GckP52792 465 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 GiprQ0P543 460 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Tubal3Q3UX10 446 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Spag6Q3V0U9 509 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Pnpla1Q3V1D5 599 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 MybphlQ5FW53 355 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gm11992Q5SS90 291 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Caprin1Q60865 707 aaKnown RBP14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Nxph1Q61200 271 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 VclQ64727 1066 aaKnown RBP14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 KdsrQ6GV12 332 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Scaf4Q6PFF0 1209 aaKnown RBP14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ube2r2Q6ZWZ2 238 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rslcan18Q7M6X5 460 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Olfr384Q7TRX8 312 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Olfr293Q7TS10 336 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Q8BGA7 448 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cox15Q8BJ03 413 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 4932414N04RikQ8CEQ9 752 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Abhd11Q8K4F5 307 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mgat5Q8R4G6 740 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rpa1Q8VEE4 623 aaKnown RBP14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Aim2Q91VJ1 354 aaKnown RBP14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ms4a10Q99N03 267 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 RpainQ9CWY9 219 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mxra7Q9CZH7 178 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ppp1r2Q9DCL8 206 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Epb41l4bQ9JMC8 527 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cdh17Q9R100 827 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Zfhx2Q2MHN3 2562 aa14.35□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cylc1A0A1B0GR13 642 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Colca2F8VPY8 239 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cyp4f17G3UW78 524 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gm29394H3BIW7 199 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Il1rnP25085 178 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Tead1P30051 426 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 MazP56671 477 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Kcnj13P86046 360 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 CrtamQ149L7 389 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Tmem217Q14AF1 189 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 CcnjlQ5SRT8 387 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mc2rQ64326 296 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ssxb5Q6XAS2 159 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Creg2Q8BGC9 288 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mospd3Q8BGG6 235 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Trim23Q8BGX0 574 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Chst8Q8BQ86 417 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Prkaa2Q8BRK8 552 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ston2Q8BZ60 895 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Pih1h3bQ8C6P5 218 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 RydenQ8CAK3 290 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 C1rbQ8CFG9 706 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Asb2Q8K0L0 634 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Agfg1Q8K2K6 561 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Nudt4Q8R2U6 179 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Trpm8Q8R4D5 1104 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Lgals12Q91VD1 314 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Usb1Q91W78 267 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Pcdhb4Q91XZ6 784 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ptbp2Q91Z31 531 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rpe65Q91ZQ5 533 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cyp4f16Q99N17 524 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Otub2Q9CQX0 234 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mau2Q9D2X5 619 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Tmem81Q9D5K1 259 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Bpifa3Q9D9J8 232 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rsph9Q9D9V4 276 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Uba7Q9DBK7 977 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Socs6Q9JLY0 533 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Csnk1eQ9JMK2 416 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rai2Q9QVY8 529 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gm29797A0A140LIA7 188 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Tnip3A0A1D5RMN0 279 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Mllt3A2AM29 569 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Klhl41A2AUC9 606 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 FanceB8JJD6 213 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 1700024B05RikE9Q6D7 167 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Vmn2r4K7N784 913 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Prl3b1P09586 222 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 H2-Q7P14429 334 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 H2-Q9P14431 200 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Bmp2P21274 394 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Kif2aP28740 705 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Impdh1P50096 514 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Ext2P70428 718 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rpl10lP86048 214 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Bcl2a1Q07440 172 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gm4981Q3ULJ8 291 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Bahd1Q497V6 772 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Cyb5d1Q5NCY3 228 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 PhgdhQ61753 533 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Dennd2cQ6P9P8 914 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Abhd10Q6PE15 297 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Rpl10Q6ZWV3 214 aaKnown RBP14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Olfr1197Q7TR13 314 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Olfr1196Q7TR14 314 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gstm7Q80W21 218 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Gxylt2Q810K9 444 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 Coq4Q8BGB8 266 aa14.34□□□□□ -0.11
Ercc1-201ENSMUST00000003645 AopepQ8BXQ6 817 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms