RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ZNF227Q86WZ6 799 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ITPRIPQ8IWB1 547 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 FTSJ3Q8IY81 847 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 APCDD1Q8J025 514 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 NAXEQ8NCW5 288 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MAPK1IP1LQ8NDC0 245 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 C1orf162Q8NEQ5 155 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 OR5M3Q8NGP4 307 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MBD3L2Q8NHZ7 208 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 STK35Q8TDR2 534 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ALG14Q96F25 216 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 BTBD6Q96KE9 485 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 RPL10LQ96L21 214 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PPM1MQ96MI6 270 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TKTL2Q9H0I9 626 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CARS2Q9HA77 564 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 NOCTQ9UK39 431 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SLC17A4Q9Y2C5 497 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 A0A1W2PNR3 127 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 A0A1W2PRQ8 180 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C5orf63A6NC05 138 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TCAF2A6NFQ2 919 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TMEM202A6NGA9 273 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C16orf96A6NNT2 1141 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 PP2D1A8MPX8 630 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FAM227AF5H4B4 570 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 QSOX1O00391 747 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 STX6O43752 255 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 RASSF9O75901 435 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 SUN1O94901 812 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FKBP9O95302 570 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 UMODP07911 640 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 HMBSP08397 361 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ICAM2P13598 275 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 PLS3P13797 630 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FOLR1P15328 257 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 XRCC1P18887 633 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 MC3RP41968 323 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 GFERP55789 205 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 NUCB1Q02818 461 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 PLAURQ03405 335 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TRIM14Q14142 442 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C1QTNF12Q5T7M4 302 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C1orf185Q5T7R7 199 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ADAM5Q6NVV9 412 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C22orf39Q6P5X5 142 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 IYDQ6PHW0 289 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 RGS9BPQ6ZS82 235 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 C1orf229Q6ZS94 237 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FKBP9P1Q75LS8 142 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 B4GALNT4Q76KP1 1039 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 MEPCEQ7L2J0 689 aaKnown RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 LIX1LQ8IVB5 337 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 BRSK2Q8IWQ3 736 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TTC30BQ8N4P2 665 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 SLC35G2Q8TBE7 412 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 M1APQ8TC57 530 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 BICD1Q96G01 975 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 HPDLQ96IR7 371 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 SGCZQ96LD1 299 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 DHRS1Q96LJ7 313 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 B9D2Q9BPU9 175 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 GATA5Q9BWX5 397 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TNMDQ9H2S6 317 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 WDR26Q9H7D7 661 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF226Q9NYT6 803 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 B4GALT6Q9UBX8 382 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CNOT8Q9UFF9 292 aaKnown RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 PLXNB1O43157 2135 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ARID1AO14497 2285 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 MDC1Q14676 2089 aaKnown RBP3.31□□□□□ -1.88
CCDC7-213ENST00000639290 RASGRF2O14827 1237 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ZBED1O96006 694 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 GSRP00390 522 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TPH1P17752 444 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ATICP31939 592 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 MAPK9P45984 424 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ARL4DP49703 201 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 SEMA3AQ14563 771 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 KLHL40Q2TBA0 621 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CR1LQ2VPA4 569 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FSCBQ5H9T9 825 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 HAUS3Q68CZ6 603 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 LCN10Q6JVE6 187 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 PGM2L1Q6PCE3 622 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 LINC00114Q6XXX2 140 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF783Q6ZMS7 281 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 TMEM26Q6ZUK4 368 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 GPRIN1Q7Z2K8 1008 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 UNC93AQ86WB7 457 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 AMIGO1Q86WK6 493 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 FUKQ8N0W3 1084 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CRYBG2Q8N1P7 616 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CSGALNACT2Q8N6G5 542 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 BANPQ8N9N5 519 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 OR10Q1Q8NGQ4 319 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 CCL4L1Q8NHW4 92 aa3.31□□□□□ -1.88
CCDC7-213ENST00000639290 ZPLD1Q8TCW7 415 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms