RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TTC27Q6P3X3 843 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 LRRC8BQ6P9F7 803 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 BORAQ6PGQ7 559 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 ZNF605Q86T29 641 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 BPHLQ86WA6 291 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 OTUD6BQ8N6M0 293 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 FCRL4Q96PJ5 515 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 TUBB2BQ9BVA1 445 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 BTRCQ9Y297 605 aa16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 TDRKHQ9Y2W6 561 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 MRPS18BQ9Y676 258 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-259ENST00000638114 GCN1Q92616 2671 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 IQCF5A8MTL0 148 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 PRMT5O14744 637 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 KRT14P02533 472 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 NTRK1P04629 796 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 TCN2P20062 427 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 F8A1P23610 371 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 CCR7P32248 378 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 SHMT2P34897 504 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 SARNPP82979 210 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 MC1RQ01726 317 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 HSPA14Q0VDF9 509 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 CDC20Q12834 499 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 KCNJ11Q14654 390 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 C16orf46Q6P387 395 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 CES3Q6UWW8 571 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 TMEM126BQ8IUX1 230 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 REXO1L1PQ8IX06 675 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 TBC1D21Q8IYX1 336 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 ADGRF3Q8IZF5 1079 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 KRT222Q8N1A0 295 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 SLC35F6Q8N357 371 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 LKAAEAR1Q8TD35 194 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 ZNF501Q96CX3 271 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 CATSPER2Q96P56 530 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 CARD6Q9BX69 1037 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 FANCEQ9HB96 536 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 MRM3Q9HC36 420 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 KCND1Q9NSA2 647 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 ACTR10Q9NZ32 417 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 POLG2Q9UHN1 485 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 PADI1Q9ULC6 663 aa16.25■□□□□ 0.19
CACNA1A-259ENST00000638114 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 PIPSLA2A3N6 862 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 MAP3K7O43318 606 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 KATNA1O75449 491 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 NDUFS3O75489 264 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 SCRG1O75711 98 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 APOA4P06727 396 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 ST6GAL1P15907 406 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 PTRHD1Q6GMV3 140 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 HOOK3Q86VS8 718 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 MPP5Q8N3R9 675 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 OR8K5Q8NH50 307 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 OR5K2Q8NHB8 316 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 ASZ1Q8WWH4 475 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 MFSD3Q96ES6 412 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 KIFC1Q9BW19 673 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 KLHL25Q9H0H3 589 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 LHX9Q9NQ69 397 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 TRMT1Q9NXH9 659 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 GNPTGQ9UJJ9 305 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 SOX13Q9UN79 622 aa16.24■□□□□ 0.19
CACNA1A-259ENST00000638114 KIF5CO60282 957 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 KDM1AO60341 852 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 CPNE3O75131 537 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 AVILO75366 819 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 VAPBO95292 243 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 SFTPCP11686 197 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 PVRP15151 417 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 COILP38432 576 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 MAGEA6P43360 314 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 CCR10P46092 362 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 NFATC3Q12968 1075 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 DNASE1L3Q13609 305 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 TMED2Q15363 201 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 ATP1A1-AS1Q5TC04 95 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 ANKRD22Q5VYY1 191 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 CASC4Q6P4E1 433 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 CCDC137Q6PK04 289 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 SPESP1Q6UW49 350 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 UNC5AQ6ZN44 842 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 VRK3Q8IV63 474 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 SLC22A15Q8IZD6 547 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 COG1Q8WTW3 980 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 CT55Q8WUE5 264 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 TRAPPC9Q96Q05 1148 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 PANX3Q96QZ0 392 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 KCNF1Q9H3M0 494 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 KCND3Q9UK17 655 aa16.23■□□□□ 0.19
CACNA1A-259ENST00000638114 PLAGL1Q9UM63 463 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms