RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 C9orf43Q8TAL5 461 aaPredicted RBP18.4■□□□□ 0.54
CLN6-221ENST00000637494 CT55Q8WUE5 264 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 CPT1BQ92523 772 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 ZNF501Q96CX3 271 aaPredicted RBP18.4■□□□□ 0.54
CLN6-221ENST00000637494 TLR10Q9BXR5 811 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 GPR87Q9BY21 358 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 TWSG1Q9GZX9 223 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 SLC2A6Q9UGQ3 507 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 TDRKHQ9Y2W6 561 aaKnown RBP18.4■□□□□ 0.54
CLN6-221ENST00000637494 PRSS21Q9Y6M0 314 aa18.4■□□□□ 0.54
CLN6-221ENST00000637494 CDC14CA4D256 554 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 BTN3A3O00478 584 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 RECKO95980 971 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 RPN2P04844 631 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 ZSCAN5DPP0CG00 497 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 F8A1P23610 371 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 NPY2RP49146 381 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 TTPAP49638 278 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 SESN2P58004 480 aaPredicted RBP18.39■□□□□ 0.53
CLN6-221ENST00000637494 FBXO38Q6PIJ6 1188 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 MICALCLQ6ZW33 695 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 OR5AR1Q8NGP9 310 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 MR1Q95460 341 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 CLIP3Q96DZ5 547 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 SGSM3Q96HU1 749 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 IL22Q9GZX6 179 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 XKR8Q9H6D3 395 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 CATSPERZQ9NTU4 200 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 ACTR10Q9NZ32 417 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 SERTAD3Q9UJW9 196 aa18.39■□□□□ 0.53
CLN6-221ENST00000637494 SLC5A10A0PJK1 596 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 TMEM150CB9EJG8 249 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 OR1I1O60431 355 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 APOA4P06727 396 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 CYP2A7P20853 494 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 SARNPP82979 210 aaKnown RBP18.38■□□□□ 0.53
CLN6-221ENST00000637494 TMED2Q15363 201 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 SIX1Q15475 284 aaPredicted RBP18.38■□□□□ 0.53
CLN6-221ENST00000637494 ATP1A1-AS1Q5TC04 95 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 OTUD6BQ8N6M0 293 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 GLIS1Q8NBF1 620 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 OR5K2Q8NHB8 316 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 ASZ1Q8WWH4 475 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 PPM1MQ96MI6 270 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 ZNF778Q96MU6 729 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 CHRAC1Q9NRG0 131 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 COL6A6A6NMZ7 2263 aa18.38■□□□□ 0.53
CLN6-221ENST00000637494 TERTO14746 1132 aaKnown RBP18.37■□□□□ 0.53
CLN6-221ENST00000637494 PFDN6O15212 129 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 HBQ1P09105 142 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 MSL3P1P0C860 447 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 ST6GAL1P15907 406 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 CSE1LP55060 971 aaKnown RBP18.37■□□□□ 0.53
CLN6-221ENST00000637494 CDK16Q00536 496 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 DNAJC21Q5F1R6 531 aaKnown RBP18.37■□□□□ 0.53
CLN6-221ENST00000637494 PTRHD1Q6GMV3 140 aaKnown RBP18.37■□□□□ 0.53
CLN6-221ENST00000637494 SPESP1Q6UW49 350 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 GPR135Q8IZ08 494 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 ADGRF3Q8IZF5 1079 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 LRFN5Q96NI6 719 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 TRAPPC9Q96Q05 1148 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 PANX3Q96QZ0 392 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 CARD6Q9BX69 1037 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 ACTL8Q9H568 366 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 OR6C2Q9NZP2 312 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 ICKQ9UPZ9 632 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 MAN2B2Q9Y2E5 1009 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 PPP2R2CQ9Y2T4 447 aa18.37■□□□□ 0.53
CLN6-221ENST00000637494 E7EQ34 232 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 MKRN2OSH3BPM6 223 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 PRMT5O14744 637 aaPredicted RBP18.36■□□□□ 0.53
CLN6-221ENST00000637494 CD3EAPO15446 510 aaKnown RBP18.36■□□□□ 0.53
CLN6-221ENST00000637494 NDUFS3O75489 264 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 ACADLP28330 430 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 PTPN4P29074 926 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 CXCR5P32302 372 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 ITGA1P56199 1179 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 NFKB2Q00653 900 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 HSPA14Q0VDF9 509 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 FAM199XQ6PEV8 388 aaPredicted RBP18.36■□□□□ 0.53
CLN6-221ENST00000637494 TTC23LQ6PF05 361 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 NAPRTQ6XQN6 538 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 UNC5AQ6ZN44 842 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 ZNF534Q76KX8 674 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 SYVN1Q86TM6 617 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 MPP5Q8N3R9 675 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 TCTN2Q96GX1 697 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 ACTR5Q9H9F9 607 aaPredicted RBP18.36■□□□□ 0.53
CLN6-221ENST00000637494 GNPTGQ9UJJ9 305 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 FARSAQ9Y285 508 aaKnown RBP18.36■□□□□ 0.53
CLN6-221ENST00000637494 KCNMB2Q9Y691 235 aa18.36■□□□□ 0.53
CLN6-221ENST00000637494 KPNA5O15131 536 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 SUV39H1O43463 412 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 CHRM5P08912 532 aaPredicted RBP18.35■□□□□ 0.53
CLN6-221ENST00000637494 KCNJ1P48048 391 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 CCZ1BP86790 482 aa18.35■□□□□ 0.53
CLN6-221ENST00000637494 CCZ1P86791 482 aaPredicted RBP18.35■□□□□ 0.53
CLN6-221ENST00000637494 LACTB2Q53H82 288 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms