RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DCDC5Q6ZRR9 648 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 NKAPQ8N5F7 415 aaKnown RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 SNX31Q8N9S9 440 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 RHEBL1Q8TAI7 183 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 FGF13Q92913 245 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 KCNA7Q96RP8 456 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 CPEB1Q9BZB8 566 aaKnown RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 MID1IP1Q9NPA3 183 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 SDHDO14521 159 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 SLC9A3R1O14745 358 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 TULP3O75386 442 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 CTSLP07711 333 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 CD247P20963 164 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 ACRV1P26436 265 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 HK3P52790 923 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 FOXA1P55317 472 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 DSTNP60981 165 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 C18orf21Q32NC0 220 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 CERS6Q6ZMG9 384 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 RAB44Q7Z6P3 723 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 STK40Q8N2I9 435 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 DCBLD1Q8N8Z6 715 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 FRS2Q8WU20 508 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 L3HYPDHQ96EM0 354 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 SORCS3Q9UPU3 1222 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 COQ6Q9Y2Z9 468 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 NOSIPQ9Y314 301 aaKnown RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 SLCO1B7G3V0H7 640 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 MTX2O75431 263 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 ZNF26P17031 533 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 XRCC1P18887 633 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 DPP6P42658 865 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 ATXN3P54252 364 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 ATP6V0D1P61421 351 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 RBFAQ8N0V3 343 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 TMEM102Q8N9M5 508 aaPredicted RBP11.3□□□□□ -0.6
CLN6-217ENST00000636964 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 NELL1Q92832 810 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 TANKQ92844 425 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 SCAMP4Q969E2 229 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 OTUB2Q96DC9 234 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 HEPHQ9BQS7 1158 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 CD274Q9NZQ7 290 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 PADI4Q9UM07 663 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 ASB1Q9Y576 335 aa11.3□□□□□ -0.6
CLN6-217ENST00000636964 PRRT4C9JH25 899 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 K7EPI3 171 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CDK14O94921 469 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 STAMBPO95630 424 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 INHBBP09529 407 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 C1SP09871 688 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CISD3P0C7P0 127 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 HLA-EP13747 358 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 THOP1P52888 689 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 NR1D2Q14995 579 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CEP78Q5JTW2 689 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CCDC81Q6ZN84 652 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 CCDC177Q9NQR7 707 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 OLAHQ9NV23 265 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 MBD1Q9UIS9 605 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 DHRS7Q9Y394 339 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 COX4I1P13073 169 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 PRDX3P30048 256 aaKnown RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 METAP1P53582 386 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 DUSP6Q16828 381 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 PDE12Q6L8Q7 609 aaKnown RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 GPSM1Q86YR5 675 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 NXPE1Q8N323 547 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 COX4I2Q96KJ9 171 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 C3orf30Q96M34 536 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 ZNF641Q96N77 438 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 SCHIP1Q9P0W5 487 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 GOLGA4Q13439 2230 aaKnown RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 ATE1O95260 518 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 GUCA1CO95843 209 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 FSHRP23945 695 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 PIK3R1P27986 724 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 PPARGP37231 505 aaPredicted RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 BCAP31P51572 246 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 NFKB2Q00653 900 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 ILF2Q12905 390 aaKnown RBP11.29□□□□□ -0.6
CLN6-217ENST00000636964 ARHGEF7Q14155 803 aa11.29□□□□□ -0.6
CLN6-217ENST00000636964 DMC1Q14565 340 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms