RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 IGHV1OR21-1A0A087WYE8 117 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CCDC187A0A096LP49 1063 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 A0A1W2PQM1 296 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ESYT3A0FGR9 886 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 A6NCN8 305 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PABPN1LA6NDY0 278 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 LILRA5A6NI73 299 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 IQCF5A8MTL0 148 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 A8MU76 341 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 SGTAO43765 313 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 NIPSNAP2O75323 286 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 UBXN7O94888 489 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 DKK1O94907 266 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ESR1P03372 595 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 RPN2P04844 631 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PROS1P07225 676 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 BRAFP15056 766 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 XRCC1P18887 633 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 IVDP26440 423 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ARNTP27540 789 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 RBMS1P29558 406 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 SLC1A2P43004 574 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CARSP49589 748 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ARL4DP49703 201 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 GABREP78334 506 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 MPP1Q00013 466 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PRKAA1Q13131 559 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CTBP1Q13363 440 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 GPR18Q14330 331 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CLCA4Q14CN2 919 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ISXQ2M1V0 245 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TYSND1Q2T9J0 566 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TTLL9Q3SXZ7 439 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 DUPD1Q68J44 220 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 IRGCQ6NXR0 463 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TTC23LQ6PF05 361 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 UNQ6494/PRO21346Q6UXR6 183 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 NAPRTQ6XQN6 538 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CCNI2Q6ZMN8 369 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CEP128Q6ZU80 1094 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TMEM26Q6ZUK4 368 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ZNF438Q7Z4V0 828 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TMEM135Q86UB9 458 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PDZD3Q86UT5 571 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 OOSP2Q86WS3 158 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PLXDC1Q8IUK5 500 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CILP2Q8IUL8 1156 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 DENND6AQ8IWF6 608 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 RAB42Q8N4Z0 105 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 LILRA3Q8N6C8 439 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 DCBLD1Q8N8Z6 715 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 GPR150Q8NGU9 434 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ASZ1Q8WWH4 475 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 JPH3Q8WXH2 748 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 IFT81Q8WYA0 676 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TFGQ92734 400 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CDKL2Q92772 493 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 GRAMD1AQ96CP6 724 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ATXN7L3BQ96GX2 97 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 SIGLEC10Q96LC7 697 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CCDC74BQ96LY2 380 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 FOPNLQ96NB1 174 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TGM7Q96PF1 710 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CMKLR1Q99788 373 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 DPYSL5Q9BPU6 564 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 NUDT22Q9BRQ3 303 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 LRRC1Q9BTT6 524 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 CARD6Q9BX69 1037 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TBC1D10AQ9BXI6 508 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TRIT1Q9H3H1 467 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 FAM114A2Q9NRY5 505 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 ZNF624Q9P2J8 865 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 FBXO5Q9UKT4 447 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 SATB2Q9UPW6 733 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 TDRKHQ9Y2W6 561 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 PTPRBP23467 1997 aa7.05□□□□□ -1.28
NPLOC4-221ENST00000625705 GVINP1Q7Z2Y8 2422 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 ELOA3CA0A087WX78 387 aaPredicted RBP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 ZCWPW2A0A1B0GU75 182 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 GSAPA4D1B5 854 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 TRABD2BA6NFA1 517 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 EIF3HO15372 352 aaKnown RBP eCLIP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 B4GAT1O43505 415 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 VPS26AO75436 327 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 MPOP05164 745 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 F7P08709 466 aaPredicted RBP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 PKMP14618 531 aaKnown RBP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 RPS3P23396 243 aaKnown RBP eCLIP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 MPSTP25325 297 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 CD1CP29017 333 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 PDHA2P29803 388 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 CCR7P32248 378 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 CSTF2P33240 577 aaKnown RBP eCLIP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 ARCN1P48444 511 aaKnown RBP7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 CD151P48509 253 aa7.04□□□□□ -1.28
NPLOC4-221ENST00000625705 SLC12A2P55011 1212 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms