RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PRKAA1Q13131 559 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 TRIP13Q15645 432 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 CYP1B1Q16678 543 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 PWWP2BQ6NUJ5 590 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 CTAGE6Q86UF2 777 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 CTAGE4Q8IX94 777 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 SPATA4Q8NEY3 305 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 PEX13Q92968 403 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 TTC1Q99614 292 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 ARHGAP9Q9BRR9 750 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 HGH1Q9BTY7 390 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 XKR8Q9H6D3 395 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 FGF21Q9NSA1 209 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 TREX1Q9NSU2 369 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 MARCH4Q9P2E8 410 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 LNPEPQ9UIQ6 1025 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 POMT2Q9UKY4 750 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 RARRES3Q9UL19 164 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 TLN1Q9Y490 2541 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 GSAPA4D1B5 854 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 SLC9B1P1A6NJY1 282 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 BHMG1C9JSJ3 638 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 ZBTB11O95625 1053 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 ITGB6P18564 788 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 NMBRP28336 390 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 PRDX3P30048 256 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 NPY2RP49146 381 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 DR1Q01658 176 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 ACY1Q03154 408 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 GPR19Q15760 415 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 TTC27Q6P3X3 843 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 CYB5D1Q6P9G0 228 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 SYDE1Q6ZW31 735 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 AMIGO1Q86WK6 493 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 CARFQ8N187 725 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 OR5AR1Q8NGP9 310 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 STAMBPL1Q96FJ0 436 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 EFHD1Q9BUP0 239 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 IL22Q9GZX6 179 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 CROTQ9UKG9 612 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 MRFAP1Q9Y605 127 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 MRPS18BQ9Y676 258 aaKnown RBP17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 SEC16AO15027 2179 aa17.43■□□□□ 0.38
SCAMP4-213ENST00000621748 IQCF5A8MTL0 148 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 TERTO14746 1132 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 FANCGO15287 622 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 CD3EAPO15446 510 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 TPBGLP0DKB5 382 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 PRKAR1AP10644 381 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 CDH3P22223 829 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 MGAT1P26572 445 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 CCR7P32248 378 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 DLSTP36957 453 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 TERF1P54274 439 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 DHX34Q14147 1143 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 ZNF605Q86T29 641 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 BPHLQ86WA6 291 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 ADGRF3Q8IZF5 1079 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 LKAAEAR1Q8TD35 194 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 STARD8Q92502 1023 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 ZNF501Q96CX3 271 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 FCRL4Q96PJ5 515 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 KRT12Q99456 494 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 DDX47Q9H0S4 455 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 C1GALT1Q9NS00 363 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 CATSPERZQ9NTU4 200 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 BFARQ9NZS9 450 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 ICKQ9UPZ9 632 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 ASF1AQ9Y294 204 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 BTRCQ9Y297 605 aa17.42■□□□□ 0.38
SCAMP4-213ENST00000621748 SNRNP200O75643 2136 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 MATN2O00339 956 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 NDC80O14777 642 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 KRT14P02533 472 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 NTRK1P04629 796 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 TPSB2P20231 275 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 VPS41P49754 854 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 CSE1LP55060 971 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 TUBB4BP68371 445 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 CDK16Q00536 496 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 TPSAB1Q15661 275 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 SYTL3Q4VX76 610 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 LRRC8BQ6P9F7 803 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 CES3Q6UWW8 571 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 VRK3Q8IV63 474 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 PITPNM3Q9BZ71 974 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 AKIRIN1Q9H9L7 192 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 SOHLH2Q9NX45 425 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 SYBUQ9NX95 663 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 ASIC3Q9UHC3 531 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 ANAPC5Q9UJX4 755 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 PADI1Q9ULC6 663 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 CDYLQ9Y232 598 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 SPTA1P02549 2419 aa17.41■□□□□ 0.38
SCAMP4-213ENST00000621748 B8ZZF3 427 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 AP3B1O00203 1094 aa17.4■□□□□ 0.38
SCAMP4-213ENST00000621748 CCNYL3P0C7X3 344 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms