RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 CCR10P46092 362 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 ARCN1P48444 511 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 KPNA2P52292 529 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 CRADDP78560 199 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 KCNAB1Q14722 419 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 TBR1Q16650 682 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 CCDC137Q6PK04 289 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 ZNF534Q76KX8 674 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 TIPARPQ7Z3E1 657 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 TMEM126BQ8IUX1 230 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 UNC5BQ8IZJ1 945 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 RAB42Q8N4Z0 105 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 OR5K2Q8NHB8 316 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 KIFC1Q9BW19 673 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC12A9Q9BXP2 914 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 AP1M1Q9BXS5 423 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 XAB2Q9HCS7 855 aaKnown RBP13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 OR6C2Q9NZP2 312 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 SERTAD3Q9UJW9 196 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
PKNOX1-210ENST00000607049 LOC101059948A0A1B0GTJ6 334 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC5A10A0PJK1 596 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC9B1P1A6NJY1 282 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 C21orf140B9A014 251 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 H3BMM5 538 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 BTN3A1O00481 513 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CES2O00748 559 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CPNE3O75131 537 aaKnown RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 KATNA1O75449 491 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SCRG1O75711 98 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 VAPBO95292 243 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 KLK3P07288 261 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 MLNP12872 115 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ITGB6P18564 788 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 TERF1P54274 439 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CSE1LP55060 971 aaKnown RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CYP4F2P78329 520 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ZNF658BQ4V348 819 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CRTC2Q53ET0 693 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 PWWP2BQ6NUJ5 590 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 PCSK4Q6UW60 755 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 OTOAQ7RTW8 1153 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ZNF843Q8N446 348 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SKA2Q8WVK7 121 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 STARD8Q92502 1023 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CPT1BQ92523 772 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 MS4A14Q96JA4 679 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 OSBPL9Q96SU4 736 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 TCF12Q99081 682 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 FAM117AQ9C073 453 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ADNPQ9H2P0 1102 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 TREX1Q9NSU2 369 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 ACTR10Q9NZ32 417 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 CROTQ9UKG9 612 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SOX13Q9UN79 622 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 HEMK1Q9Y5R4 338 aaPredicted RBP13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SDK2Q58EX2 2172 aa13.98□□□□□ -0.17
PKNOX1-210ENST00000607049 SDR42E2A6NKP2 422 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 PRKAR1AP10644 381 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 ZNF28P17035 718 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 WT1P19544 449 aaPredicted RBP13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 CYP2A7P20853 494 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 ACADLP28330 430 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 NMBRP28336 390 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 MAGEA6P43360 314 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 FNTAP49354 379 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 RPS15P62841 145 aaKnown RBP13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 PPP1R7Q15435 360 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 SPESP1Q6UW49 350 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 UNC5DQ6UXZ4 953 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 GPR135Q8IZ08 494 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC22A15Q8IZD6 547 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 GABPB2Q8TAK5 448 aaPredicted RBP13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 MAGEC3Q8TD91 643 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 SLC22A18Q96BI1 424 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 GPR87Q9BY21 358 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 XKR8Q9H6D3 395 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 LHX9Q9NQ69 397 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 SYBUQ9NX95 663 aa13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 TRMT1Q9NXH9 659 aaKnown RBP13.97□□□□□ -0.17
PKNOX1-210ENST00000607049 BTN3A3O00478 584 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 NKX2-8O15522 239 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 PHF2O75151 1096 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 NTRK1P04629 796 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 HBQ1P09105 142 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 FAM87AP0C7U9 286 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 RPS3P23396 243 aaKnown RBP eCLIP13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 CCR7P32248 378 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 CDC20Q12834 499 aa13.96□□□□□ -0.17
PKNOX1-210ENST00000607049 THOC5Q13769 683 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms