RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 LRRTM4Q86VH4 590 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 ZNF687Q8N1G0 1237 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 SYNPOQ8N3V7 929 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 ATP6V1E2Q96A05 226 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 C19orf60Q96EN9 201 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 NUSAP1Q9BXS6 441 aaKnown RBP21.08■□□□□ 0.97
USP6NL-204ENST00000606752 DPEP2Q9H4A9 486 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 KLC4Q9NSK0 619 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 ARHGEF33A8MVX0 844 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 DCXO43602 365 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 MYCLP1P12525 358 aaPredicted RBP21.08■□□□□ 0.96
USP6NL-204ENST00000606752 PIK3CGP48736 1102 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 ERVPABLB-1P60509 514 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 CDC16Q13042 620 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 XKR5Q6UX68 686 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 AMZ2Q86W34 360 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 HMGB4Q8WW32 186 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 FOXJ1Q92949 421 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 SLC7A6OSQ96CW6 309 aaPredicted RBP21.08■□□□□ 0.96
USP6NL-204ENST00000606752 BTBD1Q9H0C5 482 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 SLC32A1Q9H598 525 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 CD93Q9NPY3 652 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 ITM2CQ9NQX7 267 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 PRKAB1Q9Y478 270 aa21.08■□□□□ 0.96
USP6NL-204ENST00000606752 PCYT1BQ9Y5K3 369 aaPredicted RBP21.08■□□□□ 0.96
USP6NL-204ENST00000606752 SLC31A1O15431 190 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 OR4F21O95013 312 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 CHEK2O96017 543 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 ENO1P06733 434 aaKnown RBP21.07■□□□□ 0.96
USP6NL-204ENST00000606752 EPB42P16452 691 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 ACSL1P33121 698 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 IGFALSP35858 605 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 DGKEP52429 567 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 CPSF7Q8N684 471 aaKnown RBP21.07■□□□□ 0.96
USP6NL-204ENST00000606752 FLCNQ8NFG4 579 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 OR2T34Q8NGX1 318 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 FBXL8Q96CD0 374 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 LMAN1LQ9HAT1 526 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 ARHGEF3Q9NR81 526 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 TAGLN3Q9UI15 199 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 TIMM22Q9Y584 194 aa21.07■□□□□ 0.96
USP6NL-204ENST00000606752 CHURC1-FNTBB4DL54 471 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 PIP5K1BO14986 540 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 KMOO15229 486 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CCNG1P51959 295 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 RPA4Q13156 261 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 NFE2L1Q14494 772 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 ZXDCQ2QGD7 858 aaPredicted RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 PLA2G4EQ3MJ16 856 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 FAM219BQ5XKK7 198 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LETMD1Q6P1Q0 360 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 SYT13Q7L8C5 426 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 MILR1Q7Z6M3 343 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 TRIM69Q86WT6 500 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CHCHD4Q8N4Q1 142 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 C3orf30Q96M34 536 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CCDC138Q96M89 665 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CDK15Q96Q40 435 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LRMDAQ9H2I8 198 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 TUBB1Q9H4B7 451 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 PFDN4Q9NQP4 134 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 MRPS17Q9Y2R5 130 aaKnown RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CAPN7Q9Y6W3 813 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 KLHL33A6NCF5 533 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CFAP73A6NFT4 308 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LRRC72A6NJI9 287 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 KATNA1O75449 491 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 ADSLP30566 484 aaPredicted RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 ARL1P40616 181 aaPredicted RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 SLC6A12P48065 614 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 TRAF3Q13114 568 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LRRC32Q14392 662 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 HABP4Q5JVS0 413 aaKnown RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 TMEM198Q66K66 360 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LARP4Q71RC2 724 aaKnown RBP eCLIP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 LRRC70Q7Z2Q7 622 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 DDIASQ8IXT1 998 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 CDYL2Q8N8U2 506 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 FBXO15Q8NCQ5 510 aaPredicted RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 OR4F6Q8NGB9 312 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 APOOQ9BUR5 198 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 NTMT1Q9BV86 223 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 SGK2Q9HBY8 427 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 FZD3Q9NPG1 666 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 USP36Q9P275 1121 aaKnown RBP21.06■□□□□ 0.96
USP6NL-204ENST00000606752 SLC23A2Q9UGH3 650 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 EBF1Q9UH73 591 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 ZNHIT2Q9UHR6 403 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 ST14Q9Y5Y6 855 aa21.06■□□□□ 0.96
USP6NL-204ENST00000606752 PTPN4P29074 926 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 PTCHD3Q3KNS1 767 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 CHSY3Q70JA7 882 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 ADHFE1Q8IWW8 467 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 PGBD3Q8N328 593 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 OXR1Q8N573 874 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 DCBLD1Q8N8Z6 715 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 ATL1Q8WXF7 558 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 CATSPER2Q96P56 530 aa21.05■□□□□ 0.96
USP6NL-204ENST00000606752 CCT7Q99832 543 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms