RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 CDK5RAP1Q96SZ6 601 aaKnown RBP4.15□□□□□ -1.75
LINC00649-204ENST00000593977 CDRT15Q96T59 188 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 GPHA2Q96T91 129 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 NPAS1Q99742 590 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 BCL7BQ9BQE9 202 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 WDR83Q9BRX9 315 aaKnown RBP4.15□□□□□ -1.75
LINC00649-204ENST00000593977 EHD1Q9H4M9 534 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 POMKQ9H5K3 350 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 TBC1D17Q9HA65 648 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 MSL2Q9HCI7 577 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 ERAP1Q9NZ08 941 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 NTMQ9P121 344 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 TRMT6Q9UJA5 497 aaKnown RBP4.15□□□□□ -1.75
LINC00649-204ENST00000593977 HAO1Q9UJM8 370 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 RCOR1Q9UKL0 485 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 ITGA11Q9UKX5 1188 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 CCPG1Q9ULG6 757 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 A4GNTQ9UNA3 340 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 UBE2J1Q9Y385 318 aaPredicted RBP4.15□□□□□ -1.75
LINC00649-204ENST00000593977 NBEAL1Q6ZS30 2694 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 MYH4Q9Y623 1939 aa4.15□□□□□ -1.75
LINC00649-204ENST00000593977 SDK1Q7Z5N4 2213 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 LAMA1P25391 3075 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 AHCTF1Q8WYP5 2266 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CACNA1EQ15878 2313 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 A0A1B0GTL3 188 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 GOLGA6L7A0A1B0GV03 622 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 LNP1A1A4G5 178 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CDHR4A6H8M9 788 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 C9orf118A6NHY6 69 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 NCF1BA6NI72 391 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TBKBP1A7MCY6 615 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 C17orf100A8MU93 164 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 NCF1CA8MVU1 366 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 H0YIV9 168 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 HOXA3O43365 443 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 MTX2O75431 263 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 NDUFS3O75489 264 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SLC25A27O95847 323 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SLC16A8O95907 504 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 IL1AP01583 271 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 PLA2G1BP04054 148 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OR52Z1P0C646 297 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 POLR2MP0CAP2 368 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 HNRNPA2B1P22626 353 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 PSMA5P28066 241 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CCND2P30279 289 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 GNAQP50148 359 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 PLCD1P51178 756 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 NOVA1P51513 510 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CLCN3P51790 818 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CLCNKBP51801 687 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ARSFP54793 590 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 LOXL3P58215 753 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TAS2R50P59544 299 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 RAP2BP61225 183 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TIAL1Q01085 375 aaKnown RBP eCLIP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TFAP4Q01664 338 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ACY1Q03154 408 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 RELQ04864 619 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OVGP1Q12889 678 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 KLF10Q13118 480 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SEMA3BQ13214 749 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 DDX39BQ13838 428 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SLC39A14Q15043 492 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SNAPC1Q16533 368 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 LPAL2Q16609 132 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 FUT11Q495W5 492 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 FASTKD1Q53R41 847 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TAF1BQ53T94 588 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ZNF648Q5T619 568 aaPredicted RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 STPG1Q5TH74 334 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OR6B2Q6IFH4 312 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ANKRD54Q6NXT1 300 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 GJB7Q6PEY0 223 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 LAYNQ6UX15 382 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SLC30A10Q6XR72 485 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TAOK1Q7L7X3 1001 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ABI3BPQ7Z7G0 1075 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ADGRE4PQ86SQ3 457 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TADA2BQ86TJ2 420 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 VASH2Q86V25 355 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 RFX6Q8HWS3 928 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ZNF679Q8IYX0 411 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 FITM2Q8N6M3 262 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 SPERTQ8NA61 448 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 RNF169Q8NCN4 708 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 C11orf65Q8NCR3 313 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 CCNYQ8ND76 341 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TSPAN14Q8NG11 270 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OR13C2Q8NGS9 318 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OR2T34Q8NGX1 318 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 EXOC6Q8TAG9 804 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 DNAAF4Q8WXU2 420 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 OVCA2Q8WZ82 227 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 MIB2Q96AX9 1013 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 TRMT61AQ96FX7 289 aaKnown RBP4.14□□□□□ -1.75
LINC00649-204ENST00000593977 FAR2Q96K12 515 aa4.14□□□□□ -1.75
LINC00649-204ENST00000593977 ZNF560Q96MR9 790 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms