RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 PSKH1P11801 424 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FMO3P31513 532 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PBX1P40424 430 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RABGGTBP53611 331 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ARF3P61204 181 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TEAD4Q15561 434 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TNFAIP8L2Q6P589 184 aaPredicted RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 C1orf127Q8N9H9 656 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 OR6K6Q8NGW6 343 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SMPDL3BQ92485 455 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FAM210AQ96ND0 272 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CADM1Q9BY67 442 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 A0A1B0GVM2 712 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 A0A1W2PQ67 120 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TCAF2A6NFQ2 919 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SEPT4O43236 478 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LYPLA2O95372 231 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ATF6P18850 670 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ERVK-21P61565 698 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PUM1Q14671 1186 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HGSNATQ68CP4 663 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CAND1Q86VP6 1230 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC13A3Q8WWT9 602 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PSMG2Q969U7 264 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 NSMCE3Q96MG7 304 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 INTS10Q9NVR2 710 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GRHL1Q9NZI5 618 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 COPS7AQ9UBW8 275 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZNF639Q9UID6 485 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SAP18O00422 153 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PADI3Q9ULW8 664 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 WASF2Q9Y6W5 498 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DAPL1A0PJW8 107 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RHPN2P1A8MT19 583 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TREHO43280 583 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LINGO3P0C6S8 592 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PRKCHP24723 683 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RPS14P62263 151 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DUSP28Q4G0W2 176 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LRRC73Q5JTD7 316 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FOXR2Q6PJQ5 311 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC24A5Q71RS6 500 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 IQCHQ86VS3 1027 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 OR2AJ1Q8NGZ0 328 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HIST1H2AAQ96QV6 131 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
RAB11FIP4-210ENST00000585058 POP4O95707 220 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ITGB1P05556 798 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 AVPR1BP47901 424 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 KHKP50053 298 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CLCN7P51798 805 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 NRLP54845 237 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DCDC1P59894 354 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PYHIN1Q6K0P9 492 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PDE12Q6L8Q7 609 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 NUP54Q7Z3B4 507 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CYP2U1Q7Z449 544 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 LNX2Q8N448 690 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC6A15Q9H2J7 730 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 DUS2Q9NX74 493 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ZNF99A8MXY4 864 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FKTNO75072 461 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 NOL4O94818 638 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CD2P06729 351 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HTR7P34969 479 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PBX3P40426 434 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 FLT3LGP49771 235 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 CNTN6Q9UQ52 1028 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SH3D21A4FU49 640 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TBX1O43435 398 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 TSPAN1O60635 241 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 OR7A10O76100 309 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PGAM2P15259 253 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 ELNP15502 786 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 SLC9B1Q4ZJI4 515 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 IRF2BP1Q8IU81 584 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 C8orf48Q96LL4 319 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 MAGEH1Q9H213 219 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 UCKL1Q9NWZ5 548 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
RAB11FIP4-210ENST00000585058 C5orf51A6NDU8 294 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms