RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, human

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-206	ENST00000575320	MED11	Q9P086	117 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	PCDHGC3	Q9UN70	934 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	SPEF1	Q9Y4P9	236 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	SYN3	O14994	580 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	SERPINA3	P01011	423 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	PPP3R1	P63098	170 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	TUBA4A	P68366	448 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	DEFA5	Q01523	94 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	CSTF1	Q05048	431 aa	Known RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ARSH	Q5FYA8	562 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MINDY2	Q8NBR6	621 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	OR10H4	Q8NGA5	316 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	C17orf50	Q8WW18	174 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	PAK6	Q9NQU5	681 aa	Predicted RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	RAI2	Q9Y5P3	530 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ROBO3	Q96MS0	1386 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	GATB	O75879	557 aa	Known RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	EOMES	O95936	686 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MAGEA2	P43356	314 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	DUSP3	P51452	185 aa	Predicted RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	CDKL1	Q00532	357 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	GBE1	Q04446	702 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	P4HA3	Q7Z4N8	544 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	TBATA	Q96M53	351 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ZFP3	Q96NJ6	502 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	NUP50	Q9UKX7	468 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	TCAF1	Q9Y4C2	921 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	C5orf60	A6NFR6	353 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ANXA2P2	A6NMY6	339 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	FFAR2	O15552	330 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	OR4F21	O95013	312 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	GADD45G	O95257	159 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MATN4	O95460	622 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ANXA2	P07355	339 aa	Known RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MMP8	P22894	467 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	NMBR	P28336	390 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	NAE1	Q13564	534 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ZNF460	Q14592	562 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	AMZ1	Q400G9	498 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	PARP15	Q460N3	678 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	GPALPP1	Q8IXQ4	340 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MKL1	Q969V6	931 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	PIWIL1	Q96J94	861 aa	Known RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	HECA	Q9UBI9	543 aa	Predicted RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MAGEB17	A8MXT2	336 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	IST1	P53990	364 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	TSPAN5	P62079	268 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	BTN3A2	P78410	334 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	MED27	Q6P2C8	311 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	SMARCD3	Q6STE5	483 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	TMEM139	Q8IV31	216 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	LRRC52	Q8N7C0	313 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	OR5K1	Q8NHB7	308 aa		13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	ZC3H10	Q96K80	434 aa	Known RBP	13.74	□□□□□ -0.21
TFAP4-206	ENST00000575320	KMO	O15229	486 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ATP6V1G1	O75348	118 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	HSPB3	Q12988	150 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	FSTL4	Q6MZW2	842 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ZCCHC12	Q6PEW1	402 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	KLHDC10	Q6PID8	442 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	TMEM109	Q9BVC6	243 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ANKRA2	Q9H9E1	313 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	MARK1	Q9P0L2	795 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	GMIP	Q9P107	970 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	SLC45A1	Q9Y2W3	748 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320		E9PAM4	449 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ECHS1	P30084	290 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	SPAM1	P38567	509 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	EEF1DP3	Q658K8	133 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	MON1A	Q86VX9	555 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ATP6V1C2	Q8NEY4	427 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	FCGR1B	Q92637	280 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	SLC22A4	Q9H015	551 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	IKZF4	Q9H2S9	585 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	TVP23B	Q9NYZ1	205 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ZSCAN5B	A6NJL1	495 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	TREH	O43280	583 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ADRA1B	P35368	520 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	ARRB1	P49407	418 aa	Predicted RBP	13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	LAPTM5	Q13571	262 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	FOXR2	Q6PJQ5	311 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	GJD3	Q8N144	294 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	OR5T3	Q8NGG3	340 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	GAL3ST3	Q96A11	431 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	SDCBP2	Q9H190	292 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	CNTNAP1	P78357	1384 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	UNCX	A6NJT0	531 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	PITPNM1	O00562	1244 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	NPHS1	O60500	1241 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	MYCLP1	P12525	358 aa	Predicted RBP	13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	TIGD6	Q17RP2	521 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	HGSNAT	Q68CP4	663 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	QSOX2	Q6ZRP7	698 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	RASSF5	Q8WWW0	418 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	NKX2-4	Q9H2Z4	354 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	PLEKHA1	Q9HB21	404 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	UGT2B4	P06133	528 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	CD48	P09326	243 aa		13.73	□□□□□ -0.21
TFAP4-206	ENST00000575320	RAP2A	P10114	183 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms