RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CHAF1BQ13112 559 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 SYTL3Q4VX76 610 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 PLEKHS1Q5SXH7 462 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 LCN10Q6JVE6 187 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 APLFQ8IW19 511 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 DSELQ8IZU8 1212 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 SPC24Q8NBT2 197 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 OR5AR1Q8NGP9 310 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 ELMO1Q92556 727 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 HES6Q96HZ4 224 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 PITPNM3Q9BZ71 974 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 SLC7A5P2Q9GIP4 190 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 ACTR5Q9H9F9 607 aaPredicted RBP20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 ACTR10Q9NZ32 417 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 CAPN6Q9Y6Q1 641 aa20.49■□□□□ 0.87
CHRNB1-206ENST00000574054 NAV2Q8IVL1 2488 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 CCDC162PA2VCL2 907 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 ARGFXA6NJG6 315 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 LIN7AO14910 233 aaPredicted RBP20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 IFNB1P01574 187 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 FTH1P02794 183 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 IZUMO3Q5VZ72 239 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 PPP1R21Q6ZMI0 780 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 ADGRF3Q8IZF5 1079 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 ENDOVQ8N8Q3 282 aaKnown RBP20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 LRFN5Q96NI6 719 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 TRAPPC9Q96Q05 1148 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 SYTL2Q9HCH5 934 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 SERTAD3Q9UJW9 196 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 SNX7Q9UNH6 387 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 ICKQ9UPZ9 632 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 PLAAQ9Y263 795 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 ASF1AQ9Y294 204 aa20.48■□□□□ 0.87
CHRNB1-206ENST00000574054 PIKFYVEQ9Y2I7 2098 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 DOPEY2Q9Y3R5 2298 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 RP1L1Q8IWN7 2480 aaPredicted RBP20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 E7EVH7 732 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 QSOX1O00391 747 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 ITGA1P56199 1179 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 CDH17Q12864 832 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 LAMB3Q13751 1172 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 ITIH4Q14624 930 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 SEL1L2Q5TEA6 688 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 FAM69BQ5VUD6 431 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 SPESP1Q6UW49 350 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 PACS1Q6VY07 963 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 NAPRTQ6XQN6 538 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 TRIM73Q86UV7 250 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 SYTL1Q8IYJ3 562 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 N4BP2L2Q92802 583 aaPredicted RBP20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 ETNK1Q9HBU6 452 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 ACSS2Q9NR19 701 aa20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 TDRKHQ9Y2W6 561 aaKnown RBP20.47■□□□□ 0.87
CHRNB1-206ENST00000574054 RELNP78509 3460 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 E7EQ34 232 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 PDGFAP04085 211 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 FOXN2P32314 431 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 RORAP35398 523 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 PTGIRP43119 386 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 CCL11P51671 97 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 PGDP52209 483 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 PTCHD3Q3KNS1 767 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 ZNF789Q5FWF6 425 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 ZNF517Q6ZMY9 492 aaPredicted RBP20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 CDHR3Q6ZTQ4 885 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 GAS2L3Q86XJ1 694 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 HDAC10Q969S8 669 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 SLC25A23Q9BV35 468 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 NLNQ9BYT8 704 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 PCMTD2Q9NV79 361 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 IMPACTQ9P2X3 320 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 ZNF148Q9UQR1 794 aa20.46■□□□□ 0.87
CHRNB1-206ENST00000574054 HEATR9A2RTY3 570 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 ERI2A8K979 691 aaKnown RBP20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 LIASO43766 372 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 OR1I1O60431 355 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 RAB40ALP0C0E4 278 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 OR56A5P0C7T3 313 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 MSL3P1P0C860 447 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 ATXN8OSP0DMR3 200 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 UGT2B7P16662 529 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 PSMA3P25788 255 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 STIP1P31948 543 aaKnown RBP20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 SHMT2P34897 504 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 FDFT1P37268 417 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 CSE1LP55060 971 aaKnown RBP20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 MLLT10P55197 1068 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 LYPLAL1Q5VWZ2 237 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 AFTPHQ6ULP2 937 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 FAM198BQ6UWH4 519 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 UNC5AQ6ZN44 842 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 OR13J1Q8NGT2 312 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 TTC1Q99614 292 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 ING2Q9H160 280 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 SLC2A6Q9UGQ3 507 aa20.45■□□□□ 0.86
CHRNB1-206ENST00000574054 SEC16AO15027 2179 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 CYSRT1A8MQ03 144 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 ZNF749O43361 778 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms