RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 RHOCP08134 193 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 ITGB6P18564 788 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 PCMT1P22061 227 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 SLC11A2P49281 568 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 GP2P55259 537 aaKnown RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 VAC14Q08AM6 782 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 TRIM32Q13049 653 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 MAD2L1Q13257 205 aaPredicted RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 CTF1Q16619 201 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 GTDC1Q4AE62 458 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 CACHD1Q5VU97 1274 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 ZNF691Q5VV52 312 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 PTRHD1Q6GMV3 140 aaKnown RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 BTLAQ7Z6A9 289 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 RTN4RL1Q86UN2 441 aaPredicted RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 ANKRD13BQ86YJ7 626 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 GLB1L3Q8NCI6 653 aaPredicted RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 OR52E4Q8NGH9 312 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.05
NUP88-207ENST00000573584 OR52E6Q96RD3 313 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 ELOVL2Q9NXB9 296 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 PKP3Q9Y446 797 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 ORC6Q9Y5N6 252 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 TAPBPO15533 448 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 UGT2B11O75310 529 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 SEC22BO75396 215 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 DNAJB5O75953 348 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 GNPDA1P46926 289 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 TWF1Q12792 350 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 ZNF846Q147U1 533 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 DET1Q7L5Y6 550 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 DCP2Q8IU60 420 aaKnown RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 PARP8Q8N3A8 854 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 ZCCHC7Q8N3Z6 543 aaKnown RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 ARL10Q8N8L6 244 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 C2orf69Q8N8R5 385 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 EGFL8Q99944 293 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 NACA2Q9H009 215 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 KLQ9UEF7 1012 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 TMEM221A6NGB7 291 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 GOLGA8CPA6NN73 597 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 ZNF99A8MXY4 864 aaPredicted RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 SLC28A1O00337 649 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 KPNA4O00629 521 aaPredicted RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 SYN3O14994 580 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 XPNPEP2O43895 674 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 SERPINA1P01009 418 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 RETP07949 1114 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 PFKLP17858 780 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 CACNG1Q06432 222 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 ZNF177Q13360 481 aaPredicted RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 GPR149Q86SP6 731 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 DENND1CQ8IV53 801 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 CHCHD4Q8N4Q1 142 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 CNIH3Q8TBE1 160 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 NETO1Q8TDF5 533 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 APOL5Q9BWW9 433 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 KAT8Q9H7Z6 458 aaKnown RBP15.33■□□□□ 0.04
NUP88-207ENST00000573584 HMG20AQ9NP66 347 aa15.33■□□□□ 0.04
NUP88-207ENST00000573584 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 MTMR11A4FU01 709 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ARVCFO00192 962 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 MAN1A2O60476 641 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 CLDN11O75508 207 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ASGR1P07306 291 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ZDHHC11BP0C7U3 371 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 FKBP1BP68106 108 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 IL5RAQ01344 420 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 EMX1Q04741 257 aaPredicted RBP15.32■□□□□ 0.04
NUP88-207ENST00000573584 CDK5R2Q13319 367 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 LINGO4Q6UY18 593 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 OR10Q1Q8NGQ4 319 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 CLHC1Q8NHS4 586 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 SOCS4Q8WXH5 440 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
NUP88-207ENST00000573584 CLMPQ9H6B4 373 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 INIPQ9NRY2 104 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 SLC6A13Q9NSD5 602 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 DAPK2Q9UIK4 370 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 TMEFF2Q9UIK5 374 aaPredicted RBP15.32■□□□□ 0.04
NUP88-207ENST00000573584 DNMT3LQ9UJW3 386 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ZNF490Q9ULM2 529 aaPredicted RBP15.32■□□□□ 0.04
NUP88-207ENST00000573584 NAALAD2Q9Y3Q0 740 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 PCDHB1Q9Y5F3 818 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ILVBLA1L0T0 632 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 GLTPD2A6NH11 291 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 OR6C75A6NL08 312 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 BCKDKO14874 412 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 SLC16A6O15403 523 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ADAM23O75077 832 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 EOMESO95936 686 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 GLUD1P00367 558 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 RYKP34925 604 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ATP5C1P36542 298 aaKnown RBP15.32■□□□□ 0.04
NUP88-207ENST00000573584 DUSP4Q13115 394 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 RNF19BQ6ZMZ0 732 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 LRRC8DQ7L1W4 858 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 SLCO6A1Q86UG4 719 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 536.8 ms