RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CHAF1BQ13112 559 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 RPA4Q13156 261 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 SEMA5AQ13591 1074 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 SEMA3AQ14563 771 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 SIX1Q15475 284 aaPredicted RBP17.55■□□□□ 0.4
CHD3-214ENST00000572579 UGT8Q16880 541 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 P3H1Q32P28 736 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 IZUMO3Q5VZ72 239 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 TCTN3Q6NUS6 607 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 PACS1Q6VY07 963 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 UNC5AQ6ZN44 842 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 CDHR3Q6ZTQ4 885 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 TRIM73Q86UV7 250 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 AMIGO1Q86WK6 493 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 APLFQ8IW19 511 aaPredicted RBP17.55■□□□□ 0.4
CHD3-214ENST00000572579 DSELQ8IZU8 1212 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 LMNTD1Q8N9Z9 388 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 ADAMTS17Q8TE56 1095 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 MR1Q95460 341 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 HDAC10Q969S8 669 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 LRFN5Q96NI6 719 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 PCMTD2Q9NV79 361 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 SOHLH2Q9NX45 425 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 ACTR10Q9NZ32 417 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 ANAPC2Q9UJX6 822 aa17.55■□□□□ 0.4
CHD3-214ENST00000572579 PSMD3O43242 534 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 ZNF189O75820 626 aaPredicted RBP17.54■□□□□ 0.4
CHD3-214ENST00000572579 MSL3P1P0C860 447 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 GABRA4P48169 554 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 PRKAA1Q13131 559 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 TMTC4Q5T4D3 741 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 CYB5D1Q6P9G0 228 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 SLC13A5Q86YT5 568 aaPredicted RBP17.54■□□□□ 0.4
CHD3-214ENST00000572579 VRK3Q8IV63 474 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 TMEM151BQ8IW70 566 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 RNF10Q8N5U6 811 aaKnown RBP17.54■□□□□ 0.4
CHD3-214ENST00000572579 OR8K5Q8NH50 307 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 OR2A14Q96R47 310 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 CASS4Q9NQ75 786 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 IMPACTQ9P2X3 320 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 PLAAQ9Y263 795 aa17.54■□□□□ 0.4
CHD3-214ENST00000572579 SEC16AO15027 2179 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 TMEM150CB9EJG8 249 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 IFRD1O00458 451 aaPredicted RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 GOT2P00505 430 aaKnown RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 PTMAP06454 111 aaKnown RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 PEBP1P30086 187 aaKnown RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 CDC25BP30305 580 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 STIP1P31948 543 aaKnown RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 NSG1P42857 185 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 ACVR1Q04771 509 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 SNX1Q13596 522 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 ITIH4Q14624 930 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 PTCHD3Q3KNS1 767 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 TSTD2Q5T7W7 516 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 ZNF385CQ66K41 422 aaPredicted RBP17.53■□□□□ 0.4
CHD3-214ENST00000572579 FAM198BQ6UWH4 519 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 SYVN1Q86TM6 617 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 LKAAEAR1Q8TD35 194 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 PLAGL1Q9UM63 463 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 CDYLQ9Y232 598 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 MAN2B2Q9Y2E5 1009 aa17.53■□□□□ 0.4
CHD3-214ENST00000572579 PTPN13Q12923 2485 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 CLEC18AA5D8T8 446 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 IQCF5A8MTL0 148 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 LIN7AO14910 233 aaPredicted RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 RFPL1O75677 317 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 IFNB1P01574 187 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 UGT2B7P16662 529 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 CCR7P32248 378 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 RPL22P35268 128 aaKnown RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 ITGA1P56199 1179 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 CDH17Q12864 832 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 SPESP1Q6UW49 350 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 CLEC18BQ6UXF7 455 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 ASB18Q6ZVZ8 466 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 LINC00523Q86TU6 105 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 LDB1Q86U70 411 aaPredicted RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 FAM20CQ8IXL6 584 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 ENDOVQ8N8Q3 282 aaKnown RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 CLEC18CQ8NCF0 446 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 ELMO1Q92556 727 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 MENTQ9BUN1 341 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 SPRTNQ9H040 489 aaPredicted RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 VPS37BQ9H9H4 285 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 MARCH4Q9P2E8 410 aaPredicted RBP17.52■□□□□ 0.4
CHD3-214ENST00000572579 GUCA1BQ9UMX6 200 aa17.52■□□□□ 0.4
CHD3-214ENST00000572579 C2orf74A8MZ97 194 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 MKRN2OSH3BPM6 223 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 MATN2O00339 956 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 CHRM5P08912 532 aaPredicted RBP17.51■□□□□ 0.39
CHD3-214ENST00000572579 GSTM1P09488 218 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 MLLT10P55197 1068 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 RPS15P62841 145 aaKnown RBP17.51■□□□□ 0.39
CHD3-214ENST00000572579 GSTM4Q03013 218 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 KLRB1Q12918 225 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 ZBTB2Q8N680 514 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 DNAAF3Q8N9W5 541 aa17.51■□□□□ 0.39
CHD3-214ENST00000572579 THAP4Q8WY91 577 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms