RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TSSK1BQ9BXA7 367 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 DDX47Q9H0S4 455 aaKnown RBP7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 TRIT1Q9H3H1 467 aaKnown RBP7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 SYTL2Q9HCH5 934 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 APMAPQ9HDC9 416 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 INTS10Q9NVR2 710 aaKnown RBP7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 OR6C2Q9NZP2 312 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 ANAPC5Q9UJX4 755 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 MED16Q9Y2X0 877 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 FAM169AQ9Y6X4 670 aa7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 SMG1Q96Q15 3661 aaKnown RBP7.95□□□□□ -1.14
HDGFL3-205ENST00000568129 CTAGE9A4FU28 777 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 OR6C74A6NCV1 312 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 H3BMH7 237 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 H3BMM5 538 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 BTN3A1O00481 513 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 PRICKLE3O43900 615 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 MATN4O95460 622 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ESR1P03372 595 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 FOLR1P15328 257 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 PAMP19021 973 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 CD9P21926 228 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 PRDX3P30048 256 aaKnown RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 MAPK9P45984 424 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 GABRA4P48169 554 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 VPS41P49754 854 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 SH3BP2P78314 561 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 RHDQ02161 417 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 FRG1Q14331 258 aaKnown RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 SNAP47Q5SQN1 464 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 PLEKHS1Q5SXH7 462 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 KIAA1614Q5VZ46 1190 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 HIBCHQ6NVY1 386 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 IRGCQ6NXR0 463 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 CES3Q6UWW8 571 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 CCDC81Q6ZN84 652 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 FAM92BQ6ZTR7 304 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ZNF572Q7Z3I7 529 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 GALNT7Q86SF2 657 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 SDCCAG8Q86SQ7 713 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 AMIGO1Q86WK6 493 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 FAM129CQ86XR2 697 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 CNTN4Q8IWV2 1026 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 NLGN4XQ8N0W4 816 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 NLGN4YQ8NFZ3 816 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 OR52E1Q8NGJ3 308 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 OR5AR1Q8NGP9 310 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 OR8K5Q8NH50 307 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 HMGCLL1Q8TB92 370 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 LCN9Q8WX39 176 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ZNF501Q96CX3 271 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 LRFN5Q96NI6 719 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 BBC3Q96PG8 261 aaPredicted RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 OR2A14Q96R47 310 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 NAT9Q9BTE0 207 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 SLC12A9Q9BXP2 914 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 FAM117AQ9C073 453 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 SRMSQ9H3Y6 488 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 PLAC1Q9HBJ0 212 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 CPNE5Q9HCH3 593 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 KLHL3Q9UH77 587 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 GNPTGQ9UJJ9 305 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 ICKQ9UPZ9 632 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 VPS9D1Q9Y2B5 631 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 KLK4Q9Y5K2 254 aa7.94□□□□□ -1.14
HDGFL3-205ENST00000568129 IQCF5A8MTL0 148 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 PFDN6O15212 129 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 RAD1O60671 282 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 NDUFS3O75489 264 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 SPAG6O75602 509 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 STK17BO94768 372 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 TTC4O95801 387 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ITGB2P05107 769 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 APOA4P06727 396 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ZNF28P17035 718 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 POLR2CP19387 275 aaPredicted RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 WT1P19544 449 aaPredicted RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 SHMT2P34897 504 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 SEPHS1P49903 392 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ATP1A2P50993 1020 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 CLCN7P51798 805 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ETF1P62495 437 aaKnown RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 TUBB4BP68371 445 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 CXADRP78310 365 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ACY1Q03154 408 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 TUBB2AQ13885 445 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 DHX34Q14147 1143 aaKnown RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 MORF4L2Q15014 288 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 PLCL1Q15111 1095 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 LONRF1Q17RB8 773 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ZNF789Q5FWF6 425 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 DNTTIP2Q5QJE6 756 aaKnown RBP7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 MANEAQ5SRI9 462 aa7.93□□□□□ -1.14
HDGFL3-205ENST00000568129 ZNF549Q6P9A3 640 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms