RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 JPH3Q8WXH2 748 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 SEC14L1Q92503 715 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 CERS2Q96G23 380 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 NAF1Q96HR8 494 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 FBXO6Q9NRD1 293 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 OCIAD1Q9NX40 245 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 CRYL1Q9Y2S2 319 aa13.47□□□□□ -0.25
HERPUD1-210ENST00000565966 ESYT3A0FGR9 886 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 OR5K3A6NET4 321 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 C9orf172C9J069 976 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 EIF3HO15372 352 aaKnown RBP eCLIP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 GPC4O75487 556 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 ESR1P03372 595 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 PKMP14618 531 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 ITPKBP27987 946 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 AOAHP28039 575 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 LEPRP48357 1165 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 CSE1LP55060 971 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 MPP1Q00013 466 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 GUCY2DQ02846 1103 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 SYTL3Q4VX76 610 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 IRGCQ6NXR0 463 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 TRMT10BQ6PF06 316 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 C19orf48Q6RUI8 117 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 OOSP2Q86WS3 158 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 FAM129CQ86XR2 697 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 CEP112Q8N8E3 955 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 BMPERQ8N8U9 685 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 PHC3Q8NDX5 983 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 ASZ1Q8WWH4 475 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 PANX3Q96QZ0 392 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 SAYSD1Q9NPB0 183 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 HRASLS2Q9NWW9 162 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 DMGDHQ9UI17 866 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 PCDHGA3Q9Y5H0 932 aa13.46□□□□□ -0.25
HERPUD1-210ENST00000565966 SPTBP11277 2137 aa13.46□□□□□ -0.26
HERPUD1-210ENST00000565966 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 H3BMM5 538 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 KLK10O43240 276 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 NIPSNAP2O75323 286 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 RASSF9O75901 435 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 HAUS5O94927 633 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 APOA4P06727 396 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 CD82P27701 267 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ACADLP28330 430 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 CARSP49589 748 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 RAB15P59190 212 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 MC2RQ01718 297 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 HSPA14Q0VDF9 509 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 GLE1Q53GS7 698 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 DCAF12Q5T6F0 453 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 TEDDM1Q5T9Z0 273 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 CACHD1Q5VU97 1274 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ZNF549Q6P9A3 640 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 CNSTQ6PJW8 725 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 FAM92BQ6ZTR7 304 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 PRSS42Q7Z5A4 293 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 CNTN4Q8IWV2 1026 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 C2CD4AQ8NCU7 369 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 OR4E2Q8NGC2 313 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 LCN9Q8WX39 176 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 DDA1Q9BW61 102 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 TFB2MQ9H5Q4 396 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ZDHHC18Q9NUE0 388 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
HERPUD1-210ENST00000565966 OR6C74A6NCV1 312 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 KPNA5O15131 536 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 KIF1CO43896 1103 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 SLCO2B1O94956 709 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 GABRB3P28472 473 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 SEPHS1P49903 392 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 TLE3Q04726 772 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 PRKAA1Q13131 559 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 TMED2Q15363 201 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 COL28A1Q2UY09 1125 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 BROXQ5VW32 411 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 KIAA0408Q6ZU52 694 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 SLC22A15Q8IZD6 547 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms