RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GLIS1Q8NBF1 620 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 OR8K5Q8NH50 307 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 TFGQ92734 400 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-209ENST00000565511 TRAPPC9Q96Q05 1148 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 PLAAQ9Y263 795 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 IFRD1O00458 451 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-209ENST00000565511 LIASO43766 372 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 OR1I1O60431 355 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 ZNF189O75820 626 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-209ENST00000565511 RECKO95980 971 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 ACADLP28330 430 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 RPA4Q13156 261 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 TMTC4Q5T4D3 741 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 TCTN3Q6NUS6 607 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 CDHR3Q6ZTQ4 885 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 APLFQ8IW19 511 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-209ENST00000565511 ZNF778Q96MU6 729 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 GPR87Q9BY21 358 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 MVB12BQ9H7P6 319 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 ETNK1Q9HBU6 452 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 PCMTD2Q9NV79 361 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 ACTR10Q9NZ32 417 aa23.01■■□□□ 1.27
RAB40C-209ENST00000565511 FARSAQ9Y285 508 aaKnown RBP23.01■■□□□ 1.27
RAB40C-209ENST00000565511 NAV2Q8IVL1 2488 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 MKRN2OSH3BPM6 223 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 AP2A2O94973 939 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 CTSBP07858 339 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 SEMA3AQ14563 771 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 ZIC1Q15915 447 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 PTCHD3Q3KNS1 767 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 PACS1Q6VY07 963 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 ASB18Q6ZVZ8 466 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 SYVN1Q86TM6 617 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 AMIGO1Q86WK6 493 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 ENDOVQ8N8Q3 282 aaKnown RBP23■■□□□ 1.27
RAB40C-209ENST00000565511 FLVCR1-AS1Q8TAF5 88 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 LKAAEAR1Q8TD35 194 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 ADAMTS17Q8TE56 1095 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 C1orf54Q8WWF1 131 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 LRRC45Q96CN5 670 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 LRFN5Q96NI6 719 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 VPS37BQ9H9H4 285 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 FAM60AQ9NP50 221 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 SPHK1Q9NYA1 384 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 PLAGL1Q9UM63 463 aa23■■□□□ 1.27
RAB40C-209ENST00000565511 USP9XQ93008 2570 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-209ENST00000565511 SLC5A10A0PJK1 596 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 BHMG1C9JSJ3 638 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-209ENST00000565511 MEN1O00255 615 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 MATN2O00339 956 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 PTGIRP43119 386 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 KLRB1Q12918 225 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 ITIH4Q14624 930 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 KCTD19Q17RG1 926 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-209ENST00000565511 IZUMO3Q5VZ72 239 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 ZNF534Q76KX8 674 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 ELMO1Q92556 727 aa22.99■■□□□ 1.27
RAB40C-209ENST00000565511 ARGFXA6NJG6 315 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 PSMD3O43242 534 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 SUN1O94901 812 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 GOT2P00505 430 aaKnown RBP22.98■■□□□ 1.27
RAB40C-209ENST00000565511 UGT2B7P16662 529 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 PEBP1P30086 187 aaKnown RBP22.98■■□□□ 1.27
RAB40C-209ENST00000565511 NSG1P42857 185 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 GABRA4P48169 554 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 MLLT10P55197 1068 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 RPS15P62841 145 aaKnown RBP22.98■■□□□ 1.27
RAB40C-209ENST00000565511 SRSF1Q07955 248 aaKnown RBP eCLIP22.98■■□□□ 1.27
RAB40C-209ENST00000565511 DEFB110Q30KQ9 67 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 SPESP1Q6UW49 350 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 UNC5AQ6ZN44 842 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 LMNTD1Q8N9Z9 388 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 CPT1BQ92523 772 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 HDAC10Q969S8 669 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 IMPACTQ9P2X3 320 aa22.98■■□□□ 1.27
RAB40C-209ENST00000565511 C2orf74A8MZ97 194 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 H3BMH7 237 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 LIN7AO14910 233 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 IFNB1P01574 187 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 CDC25BP30305 580 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 CSE1LP55060 971 aaKnown RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 CDH17Q12864 832 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 SNX1Q13596 522 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 SIX1Q15475 284 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 TSTD2Q5T7W7 516 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 ZNF385CQ66K41 422 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 SLC13A5Q86YT5 568 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 TMEM151BQ8IW70 566 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 SYTL1Q8IYJ3 562 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 DNAAF3Q8N9W5 541 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 MIB2Q96AX9 1013 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 CLIP3Q96DZ5 547 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 OR2A14Q96R47 310 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 ACTR5Q9H9F9 607 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-209ENST00000565511 FANCEQ9HB96 536 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 ASF1AQ9Y294 204 aa22.97■■□□□ 1.27
RAB40C-209ENST00000565511 GSTM1P09488 218 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 MSL3P1P0C860 447 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 ZSCAN5DPP0CG00 497 aa22.96■■□□□ 1.27
RAB40C-209ENST00000565511 CYP2A7P20853 494 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms