RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 LNPEPQ9UIQ6 1025 aa11.95□□□□□ -0.5
SPG7-211ENST00000565370 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
SPG7-211ENST00000565370 TCRBV7S3A2A0A539 114 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 MAGEB16A2A368 324 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ZNF891A8MT65 544 aaPredicted RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 BTN3A1O00481 513 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 VAPBO95292 243 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 PRB1P04280 392 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ITGB2P05107 769 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 FGF5P12034 268 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 LIFP15018 202 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ITGB6P18564 788 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 RPS3P23396 243 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPG7-211ENST00000565370 ARCN1P48444 511 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 KPNA2P52292 529 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 CSE1LP55060 971 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 EIF3BP55884 814 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 PRKG2Q13237 762 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 SEMA3AQ14563 771 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 DCUN1D3Q8IWE4 304 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 PPIL6Q8IXY8 311 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 SLC22A15Q8IZD6 547 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 OR5AR1Q8NGP9 310 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 GABPB2Q8TAK5 448 aaPredicted RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ZNF669Q96BR6 464 aaPredicted RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 MFSD3Q96ES6 412 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ELMO2Q96JJ3 720 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 FCRL4Q96PJ5 515 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 TCF12Q99081 682 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 ARHGAP9Q9BRR9 750 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 FGF21Q9NSA1 209 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 MARCH4Q9P2E8 410 aaPredicted RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 BTRCQ9Y297 605 aa11.94□□□□□ -0.5
SPG7-211ENST00000565370 TDRKHQ9Y2W6 561 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 FLNBO75369 2602 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 HELZ2Q9BYK8 2649 aaKnown RBP11.94□□□□□ -0.5
SPG7-211ENST00000565370 FAM237BA0A1B0GVD1 139 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 PIPSLA2A3N6 862 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CTAGE9A4FU28 777 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 SDR42E2A6NKP2 422 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 GOLGA8MH3BSY2 632 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 ZNF185O15231 689 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CPNE3O75131 537 aaKnown RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 ESR1P03372 595 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CCNYL3P0C7X3 344 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 EBLN1P0CF75 366 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 STAT5AP42229 794 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 TUBB4BP68371 445 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 MC1RQ01726 317 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 SRSF6Q13247 344 aaKnown RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 THOC5Q13769 683 aaKnown RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 TUBB2AQ13885 445 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 DHX34Q14147 1143 aaKnown RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 KCNAB1Q14722 419 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 TYSND1Q2T9J0 566 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 ANKRD22Q5VYY1 191 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 KIAA1614Q5VZ46 1190 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 ZNF470Q6ECI4 717 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 TTC23LQ6PF05 361 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CES3Q6UWW8 571 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 C6orf15Q6UXA7 325 aaPredicted RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 UNC5DQ6UXZ4 953 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 OTOAQ7RTW8 1153 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 LDB1Q86U70 411 aaPredicted RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 PHC3Q8NDX5 983 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CALML6Q8TD86 181 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 SKA2Q8WVK7 121 aaPredicted RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 N4BP2L2Q92802 583 aaPredicted RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 CAPZA3Q96KX2 299 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 FOPNLQ96NB1 174 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 P2RY12Q9H244 342 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 SYTL2Q9HCH5 934 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 INTS10Q9NVR2 710 aaKnown RBP11.93□□□□□ -0.5
SPG7-211ENST00000565370 ACTR10Q9NZ32 417 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 OR6C2Q9NZP2 312 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 MAD1L1Q9Y6D9 718 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
SPG7-211ENST00000565370 USP27XA6NNY8 438 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 E5RI56 91 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 AVILO75366 819 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 SPAG6O75602 509 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 FOLR1P15328 257 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 ARNTP27540 789 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 ACADLP28330 430 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 CCR7P32248 378 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 PAFAH1B1P43034 410 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 PTK6Q13882 451 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 PLEKHS1Q5SXH7 462 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 SPESP1Q6UW49 350 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 NAPRTQ6XQN6 538 aa11.92□□□□□ -0.5
SPG7-211ENST00000565370 SYDE1Q6ZW31 735 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms