RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZFP36L1Q07352 338 aaKnown RBP15.55■□□□□ 0.08
RAB40C-208ENST00000564703 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
RAB40C-208ENST00000564703 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 ACSBG2Q5FVE4 666 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 HECTD2Q5U5R9 776 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 LRRC8EQ6NSJ5 796 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 IRGCQ6NXR0 463 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 AMIGO1Q86WK6 493 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 RAB42Q8N4Z0 105 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 PPM1NQ8N819 430 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 WDR36Q8NI36 951 aaKnown RBP15.55■□□□□ 0.08
RAB40C-208ENST00000564703 JPH3Q8WXH2 748 aaPredicted RBP15.55■□□□□ 0.08
RAB40C-208ENST00000564703 ATXN7L3BQ96GX2 97 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 CMKLR1Q99788 373 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 CPNE1Q99829 537 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 NRSN2Q9GZP1 204 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 SEMA6CQ9H3T2 930 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 SLC17A6Q9P2U8 582 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 GALPQ9UBC7 116 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 KLHL3Q9UH77 587 aa15.55■□□□□ 0.08
RAB40C-208ENST00000564703 BPTFQ12830 3046 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CCDC187A0A096LP49 1063 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 IGHV5-10-1A0A0J9YXX1 117 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 FAM159BA6NKW6 160 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 A8MU76 341 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CAPN5O15484 640 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CD9P21926 228 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 MCM3P25205 808 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CSTF2P33240 577 aaKnown RBP eCLIP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 SHMT2P34897 504 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 SPRP35270 261 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CCNFP41002 786 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 ABCG1P45844 678 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 EIF3IQ13347 325 aaKnown RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 NAB1Q13506 487 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 KBTBD12Q3ZCT8 623 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 GRTP1Q5TC63 336 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 FOXR1Q6PIV2 292 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 ZNF574Q6ZN55 896 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 NEK10Q6ZWH5 1172 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 RAB11FIP2Q7L804 512 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 B3GNT8Q7Z7M8 397 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 ZC3HC1Q86WB0 502 aaKnown RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 EIF1ADQ8N9N8 165 aaKnown RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 LRRN4CLQ8ND94 238 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 OR52E1Q8NGJ3 308 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 RAD51AP1Q96B01 352 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 TGM7Q96PF1 710 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CYTH2Q99418 400 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 RAB33BQ9H082 229 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 RHOJQ9H4E5 214 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 EPHA6Q9UF33 1036 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 TSR3Q9UJK0 312 aaKnown RBP15.54■□□□□ 0.08
RAB40C-208ENST00000564703 SLC39A10Q9ULF5 831 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 PSAT1Q9Y617 370 aa15.54■□□□□ 0.08
RAB40C-208ENST00000564703 CACNA1AO00555 2505 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CXorf49A8MYA2 514 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 EIF3FO00303 357 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 MATN2O00339 956 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 HGSO14964 777 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 ZBTB14O43829 449 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 RASSF9O75901 435 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 PIAS1O75925 651 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CATP04040 527 aaKnown RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 MPC1LP0DKB6 136 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 MAP4P27816 1152 aaKnown RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 RBMS1P29558 406 aaKnown RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 GP5P40197 560 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CAPZBP47756 277 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 IL2P60568 153 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CFHR1Q03591 330 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 C3orf38Q5JPI3 329 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 RBM20Q5T481 1227 aaKnown RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 TMPRSS9Q7Z410 1059 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 SLITRK4Q8IW52 837 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 DCUN1D3Q8IWE4 304 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 LSMEM2Q8N112 164 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 FBXO39Q8N4B4 442 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CD200R1Q8TD46 325 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 UBXN4Q92575 508 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 RSC1A1Q92681 617 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 LIN37Q96GY3 246 aaPredicted RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CCDC74BQ96LY2 380 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 CDC42EP4Q9H3Q1 356 aaKnown RBP15.53■□□□□ 0.08
RAB40C-208ENST00000564703 POLR1BQ9H9Y6 1135 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 SYTL2Q9HCH5 934 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 SMYD2Q9NRG4 433 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 NINJ2Q9NZG7 142 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 PDP2Q9P2J9 529 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 LNPEPQ9UIQ6 1025 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 IKBKGQ9Y6K9 419 aa15.53■□□□□ 0.08
RAB40C-208ENST00000564703 FAM95CA0A1B0GW59 222 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 GSAPA4D1B5 854 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 PABPN1LA6NDY0 278 aaKnown RBP15.52■□□□□ 0.08
RAB40C-208ENST00000564703 OR5K3A6NET4 321 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 AGRPO00253 132 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 TOX3O15405 576 aaPredicted RBP15.52■□□□□ 0.08
RAB40C-208ENST00000564703 MAP3K7O43318 606 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms