RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	VWA5A	O00534	786 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	HSPB6	O14558	160 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPOP	O43791	374 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF254	O75437	659 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	FLOT1	O75955	427 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	EPN2	O95208	641 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	NDUFB10	O96000	172 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	FGB	P02675	491 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	MMP3	P08254	477 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	HOXC6	P09630	235 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	UNG	P13051	313 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ENO3	P13929	434 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF8	P17098	575 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	EPHA8	P29322	1005 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	AVPR1A	P37288	418 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ACAA2	P42765	397 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ALDH7A1	P49419	539 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	CLCN5	P51795	746 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	PPP5C	P53041	499 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	GRB14	Q14449	540 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	NEDD9	Q14511	834 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	RBMS2	Q15434	407 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	TBCE	Q15813	527 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	INA	Q16352	499 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCL14	Q16627	93 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	GSTA3	Q16772	222 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	IMMT	Q16891	758 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	MCMDC2	Q4G0Z9	681 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	FRMPD3	Q5JV73	1810 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	C10orf25	Q5T742	122 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	HEPHL1	Q6MZM0	1159 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC46A3	Q7Z3Q1	461 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	MRPL10	Q7Z7H8	261 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ADCK1	Q86TW2	530 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	TBC1D26	Q86UD7	250 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPATA24	Q86W54	205 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	HDDC3	Q8N4P3	179 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	LINC00469	Q8N7U9	141 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	OR56B2P	Q8NGI1	322 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPATA20	Q8TB22	786 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC5A11	Q8WWX8	675 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	OTULIN	Q96BN8	352 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	RNF183	Q96D59	192 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	FAM120B	Q96EK7	910 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	NLRP4	Q96MN2	994 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	GFM1	Q96RP9	751 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	H2AFJ	Q9BTM1	129 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	CAPS2	Q9BXY5	557 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ITPA	Q9BY32	194 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SPATC1L	Q9H0A9	340 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	WDR6	Q9NNW5	1121 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	FZD3	Q9NPG1	666 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	CD93	Q9NPY3	652 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	SEPT11	Q9NVA2	429 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	COX16	Q9P0S2	106 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	MYH4	Q9Y623	1939 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	HS3ST3B1	Q9Y662	390 aa		4.08	□□□□□ -1.76
LRRC28-222	ENST00000561431	NEDD4	P46934	1319 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431		A0A0U1RQK1	487 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TMEM272	A0A1B0GTI8	110 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ZNF320	A2RRD8	509 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	SLC15A5	A6NIM6	579 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431		F5H6K3	240 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TAF4	O00268	1085 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ATP2A1	O14983	1001 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TNFSF14	O43557	240 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PEX11A	O75192	247 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	GJB3	O75712	270 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	NDUFB8	O95169	186 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCNDBP1	O95273	360 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	FGFR1OP	O95684	399 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	AFP	P02771	609 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PTGER1	P34995	402 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	GP5	P40197	560 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ENTPD1	P49961	510 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PEX5	P50542	639 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CDH12	P55289	794 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	GMFB	P60983	142 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	RPS3A	P61247	264 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	HAND2	P61296	217 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TFAP4	Q01664	338 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	KLRC3	Q07444	240 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CCDC173	Q0VFZ6	552 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CAPS	Q13938	189 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CLPP	Q16740	277 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	SMU1	Q2TAY7	513 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	PRICKLE4	Q2TBC4	344 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	METTL11B	Q5VVY1	283 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ATG9B	Q674R7	924 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	TTC19	Q6DKK2	380 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	ARHGAP11A	Q6P4F7	1023 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	INO80C	Q6PI98	192 aa	Predicted RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	KLHL24	Q6TFL4	600 aa		4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	CWC27	Q6UX04	472 aa	Known RBP	4.07	□□□□□ -1.76
LRRC28-222	ENST00000561431	MEX3B	Q6ZN04	569 aa	Known RBP	4.07	□□□□□ -1.76

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