RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.14□□□□□ -1.59
HERC1-213ENST00000561359 ABCG8Q9H221 673 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 NOL6Q9H6R4 1146 aaKnown RBP5.14□□□□□ -1.59
HERC1-213ENST00000561359 SLC40A1Q9NP59 571 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 SLC6A20Q9NP91 592 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 PLCB1Q9NQ66 1216 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 POT1Q9NUX5 634 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 VPS18Q9P253 973 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 NDOR1Q9UHB4 597 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 PPT2Q9UMR5 302 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 DNAJC16Q9Y2G8 782 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 LUC7L2Q9Y383 392 aaKnown RBP5.14□□□□□ -1.59
HERC1-213ENST00000561359 GTF3C1Q12789 2109 aa5.14□□□□□ -1.59
HERC1-213ENST00000561359 DOCK4Q8N1I0 1966 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 NKX2-6A6NCS4 301 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 NPIPB15A6NHN6 443 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 FAM90A27PA6NNH2 459 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 FAM227AF5H4B4 570 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 J3KR12 359 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 TRAFD1O14545 582 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 CTAG2O75638 210 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 MTA2O94776 668 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CPP00450 1065 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CD63P08962 238 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 HBQ1P09105 142 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 LHCGRP22888 699 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 RPL10P27635 214 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 EPHB2P29323 1055 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 USP8P40818 1118 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 FMO5P49326 533 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 TNFSF10P50591 281 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CLCNKAP51800 687 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 YBEYP58557 167 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 GCNT1Q02742 428 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CETN1Q12798 172 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PTPRRQ15256 657 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 KCNMB1Q16558 191 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 INSCQ1MX18 579 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PARP15Q460N3 678 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PTPN20Q4JDL3 420 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 ZFYVE27Q5T4F4 411 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 FAM102AQ5T9C2 384 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 C1orf189Q5VU69 101 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 ARMC6Q6NXE6 501 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 C3P1Q6ZMU1 363 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 THAP5Q7Z6K1 395 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 KRTAP1-3Q8IUG1 177 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 ZDHHC17Q8IUH5 632 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 RTL3Q8N8U3 475 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 GOLM1Q8NBJ4 401 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 LINC00301Q8NCQ3 95 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 OR1L3Q8NH93 324 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 GOT1L1Q8NHS2 421 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 AGAP11Q8TF27 550 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 SLC35C1Q96A29 364 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 MBD6Q96DN6 1003 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PAGE5Q96GU1 130 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CFAP57Q96MR6 1250 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 KREMEN1Q96MU8 473 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PWWP2AQ96N64 755 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 AGAP2Q99490 1192 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 GPATCH1Q9BRR8 931 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 RSRP1Q9BUV0 290 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 RIOK2Q9BVS4 552 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 CINPQ9BW66 212 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 MAGEB5Q9BZ81 275 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 RMI1Q9H9A7 625 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 UPF2Q9HAU5 1272 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 KCNJ16Q9NPI9 418 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 SEPT11Q9NVA2 429 aaKnown RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 GPATCH2LQ9NWQ4 482 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 PLA2G3Q9NZ20 509 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 LRFN1Q9P244 771 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 IFT80Q9P2H3 777 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 TRIM10Q9UDY6 481 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 ARMCX3Q9UH62 379 aaPredicted RBP5.13□□□□□ -1.59
HERC1-213ENST00000561359 SERTAD3Q9UJW9 196 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 CNTN6Q9UQ52 1028 aa5.13□□□□□ -1.59
HERC1-213ENST00000561359 NOTCH1P46531 2555 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 C17orf113A0A1B0GUU1 675 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 FAM237BA0A1B0GVD1 139 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 A0A1W2PQ67 120 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 FAM170AA1A519 330 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SLC9B1P1A6NJY1 282 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 WASH4PA8MWX3 477 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 E7EQ34 232 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 E9PLN8 166 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 GOLGA8SH3BPF8 625 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SOCS6O14544 535 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SMAD7O15105 426 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 SLC16A3O15427 465 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 ZNF749O43361 778 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 NUAK1O60285 661 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 PRAMEF11O60813 436 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 WISP2O76076 250 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 KLHL18O94889 574 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ZNF202O95125 648 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms