RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NFASCO94856 1347 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 BAZ2BQ9UIF8 2168 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CCNT1O60563 726 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 PRAMEF4O60810 478 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 GRIA3P42263 894 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 PMP22Q01453 160 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 BST1Q10588 318 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SELPLGQ14242 412 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MXD4Q14582 209 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 FASTKD3Q14CZ7 662 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DUSP7Q16829 419 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 GJB7Q6PEY0 223 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DPP8Q6V1X1 898 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TRIM72Q6ZMU5 477 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CRLF3Q8IUI8 442 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM9CQ8IZT9 166 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 DAGLBQ8NCG7 672 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 SGCDQ92629 289 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 TUBA1CQ9BQE3 449 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MS4A7Q9GZW8 240 aaPredicted RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 COQ10BQ9H8M1 238 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 AKIP1Q9NQ31 210 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 C8orf4Q9NR00 106 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 GIMAP4Q9NUV9 329 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 EIF3LQ9Y262 564 aaKnown RBP6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 CCL27Q9Y4X3 112 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 MAU2Q9Y6X3 613 aa6.63□□□□□ -1.35
TSPAN3-209ENST00000560715 PLIN4Q96Q06 1357 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 A0A0A6YYC8 382 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 I3L1I5 382 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF254O75437 659 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 WISP1O95388 367 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 UGT2B4P06133 528 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ADSSP30520 456 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 RRM2P31350 389 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ACAA2P42765 397 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ASMTP46597 345 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ARL4DP49703 201 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 GPC5P78333 572 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 OCA2Q04671 838 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TUBB3Q13509 450 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 DLG2Q15700 870 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 NRF1Q16656 503 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 UBE2SQ16763 222 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 C9orf152Q5JTZ5 239 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ARHGAP40Q5TG30 622 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB11FIP2Q7L804 512 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 MON1AQ86VX9 555 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 MAML2Q8IZL2 1156 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC44A5Q8NCS7 719 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ABHD11Q8NFV4 315 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 GRPEL2Q8TAA5 225 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SETD6Q8TBK2 473 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CLEC4DQ8WXI8 215 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CPT1BQ92523 772 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 RAD54LQ92698 747 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ELMOD3Q96FG2 381 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 KLF6Q99612 283 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TXN2Q99757 166 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 EBF4Q9BQW3 602 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 GPN2Q9H9Y4 310 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 GCNT4Q9P109 453 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ZC3H7BQ9UGR2 993 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 PRPF19Q9UMS4 504 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC45A2Q9UMX9 530 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF646O15015 1829 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 OR5K3A6NET4 321 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 AGAP5A6NIR3 686 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 F5H6K3 240 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 C4BPAP04003 597 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 KLRC2P26717 231 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CBX5P45973 191 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 AP2S1P53680 142 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC18A2Q05940 514 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CETN1Q12798 172 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SNTB1Q13884 538 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 HERC3Q15034 1050 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CDK10Q15131 360 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CEBPEQ15744 281 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TEX44Q53QW1 395 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CCNJQ5T5M9 372 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 LINC00299Q6ZSB3 139 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 DGLUCYQ7Z3D6 616 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM90A1Q86YD7 464 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SPATA2LQ8IUW3 424 aaPredicted RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM109AQ8N4B1 249 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM47BQ8NA70 645 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM116Q8NCL8 245 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM216AQ8WUB2 273 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TFB1MQ8WVM0 346 aaKnown RBP6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 S100ZQ8WXG8 99 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms