RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 PVRP15151 417 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 ST6GAL1P15907 406 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 ARNTP27540 789 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 DLSTP36957 453 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 HSD11B2P80365 405 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 BASP1P80723 227 aaKnown RBP13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 NFATC3Q12968 1075 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 ABRQ12979 859 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 KRT33BQ14525 404 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 TTC27Q6P3X3 843 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 KMT5CQ86Y97 462 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 VRK3Q8IV63 474 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 SLC38A9Q8NBW4 561 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 OR6P1Q8NGX9 317 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 OR4L1Q8NH43 312 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 ANKRD7Q92527 254 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 KIAA1143Q96AT1 154 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 STAMBPL1Q96FJ0 436 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 ARHGAP9Q9BRR9 750 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 PITPNM3Q9BZ71 974 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 KLHL25Q9H0H3 589 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 SRMSQ9H3Y6 488 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 VPS37BQ9H9H4 285 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 CDC23Q9UJX2 597 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 RARRES3Q9UL19 164 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 CDYLQ9Y232 598 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 PRRC2CQ9Y520 2896 aaKnown RBP13.59□□□□□ -0.23
TNFAIP2-207ENST00000560562 GSAPA4D1B5 854 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 IFRD1O00458 451 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 LIN7AO14910 233 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 ZIC2O95409 532 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 NMBRP28336 390 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 PRDX3P30048 256 aaKnown RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 CCR7P32248 378 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 CSE1LP55060 971 aaKnown RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 POLE2P56282 527 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TUBB4BP68371 445 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 ZNF789Q5FWF6 425 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 PAPD7Q5XG87 772 aaKnown RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TMEM135Q86UB9 458 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TRIM73Q86UV7 250 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 LRRN4CLQ8ND94 238 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 FLVCR1-AS1Q8TAF5 88 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 SGSM3Q96HU1 749 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TRIM56Q9BRZ2 755 aaKnown RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TWSG1Q9GZX9 223 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 PDE7BQ9NP56 450 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 LHX9Q9NQ69 397 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 SYBUQ9NX95 663 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 TTC7AQ9ULT0 858 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 PLAGL1Q9UM63 463 aa13.58□□□□□ -0.24
TNFAIP2-207ENST00000560562 HCRTR1O43613 425 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 GAS8O95995 478 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 FTH1P02794 183 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 GSTM1P09488 218 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 CDH3P22223 829 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 MGAT1P26572 445 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 VPS41P49754 854 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 PRAMEP78395 509 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 GSTM4Q03013 218 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 ACY1Q03154 408 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 GPS2Q13227 327 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 LAMB3Q13751 1172 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 KCNJ11Q14654 390 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 PCID2Q5JVF3 399 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 LCN10Q6JVE6 187 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 ARMC6Q6NXE6 501 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 C16orf46Q6P387 395 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 CES3Q6UWW8 571 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 AMIGO1Q86WK6 493 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 LMNTD1Q8N9Z9 388 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 PEX13Q92968 403 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 C1GALT1Q9NS00 363 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 SOHLH2Q9NX45 425 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 SPHK1Q9NYA1 384 aa13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
TNFAIP2-207ENST00000560562 TMEM63AO94886 807 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 TCN2P20062 427 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 PEBP1P30086 187 aaKnown RBP13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 ARL4DP49703 201 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 RPS18P62269 152 aaKnown RBP13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 PRKAA1Q13131 559 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 DNASE1L3Q13609 305 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 ZIC1Q15915 447 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 DEFB109BQ30KR1 87 aa13.56□□□□□ -0.24
TNFAIP2-207ENST00000560562 FASTKD1Q53R41 847 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms