RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 TRIT1Q9H3H1 467 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 SRMSQ9H3Y6 488 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 FAM169AQ9Y6X4 670 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 CCDC188H7C350 402 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 KPNA5O15131 536 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ATXN7O15265 892 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 TP73O15350 636 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 RAD1O60671 282 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 NDUFS3O75489 264 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 RASSF9O75901 435 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 STK17BO94768 372 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ZBTB11O95625 1053 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 FOLR1P15328 257 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 PAMP19021 973 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 HSD11B2P80365 405 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ABHD18Q0P651 414 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 SRSF6Q13247 344 aaKnown RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 CTSL3PQ5NE16 218 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 MANEAQ5SRI9 462 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ARHGAP40Q5TG30 622 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 NEPROQ6NW34 567 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 CYB5D1Q6P9G0 228 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 NAPRTQ6XQN6 538 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 AMIGO1Q86WK6 493 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 LMNTD2Q8IXW0 634 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 OR5AR1Q8NGP9 310 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 FLVCR1-AS1Q8TAF5 88 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 RUNDC3BQ96NL0 473 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 PANX3Q96QZ0 392 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 OR6C1Q96RD1 312 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 NRTNQ99748 197 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 CTRCQ99895 268 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 TRIM56Q9BRZ2 755 aaKnown RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 CHRNA10Q9GZZ6 450 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 INTS10Q9NVR2 710 aaKnown RBP12.82□□□□□ -0.36
SMAD3-213ENST00000560175 GNPTGQ9UJJ9 305 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ICKQ9UPZ9 632 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 ASF1AQ9Y294 204 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 PCM1Q15154 2024 aa12.82□□□□□ -0.36
SMAD3-213ENST00000560175 UBA6A0AVT1 1052 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 GOLGA8KD6RF30 607 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 GOLGA8TH3BQL2 631 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 GOLGA8MH3BSY2 632 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ERVH48-1M5A8F1 160 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 BTN3A1O00481 513 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 KALRNO60229 2985 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 SPAG6O75602 509 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ESR1P03372 595 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 APOA4P06727 396 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF28P17035 718 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 SHMT2P34897 504 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ATP1A2P50993 1020 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 TERF1P54274 439 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ACY1Q03154 408 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 HSPA14Q0VDF9 509 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 PRKAA1Q13131 559 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 PRKG2Q13237 762 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 DHX34Q14147 1143 aaKnown RBP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 GRB7Q14451 532 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 BRD3Q15059 726 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 KYNUQ16719 465 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 PLEKHS1Q5SXH7 462 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 UNC5DQ6UXZ4 953 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 UNC5AQ6ZN44 842 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 CACNA2D3Q8IZS8 1091 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 NLGN4XQ8N0W4 816 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 KRT222Q8N1A0 295 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 SIDT2Q8NBJ9 832 aaKnown RBP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 NLGN4YQ8NFZ3 816 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 OR8K5Q8NH50 307 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF501Q96CX3 271 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 SLC12A9Q9BXP2 914 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 SYTL2Q9HCH5 934 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 OR6C2Q9NZP2 312 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 KLHL42Q9P2K6 505 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMAD3-213ENST00000560175 RPS6KL1Q9Y6S9 549 aa12.81□□□□□ -0.36
SMAD3-213ENST00000560175 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 C2orf74A8MZ97 194 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 H3BMM5 538 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 SMAPO00193 183 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 TERTO14746 1132 aaKnown RBP12.8□□□□□ -0.36
SMAD3-213ENST00000560175 PFDN6O15212 129 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 MATN4O95460 622 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 ATP5DP30049 168 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 TUBB4BP68371 445 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 FOXM1Q08050 763 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 TUBB2AQ13885 445 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 MORF4L2Q15014 288 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 CRTC2Q53ET0 693 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-213ENST00000560175 ZNF789Q5FWF6 425 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 KIAA1614Q5VZ46 1190 aa12.8□□□□□ -0.36
SMAD3-213ENST00000560175 PTRHD1Q6GMV3 140 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms