RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 LRRC45Q96CN5 670 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 CATSPER2Q96P56 530 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 RANBP9Q96S59 729 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 EFHD1Q9BUP0 239 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 TRIM55Q9BYV6 548 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 TWSG1Q9GZX9 223 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 ADNPQ9H2P0 1102 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 TFB2MQ9H5Q4 396 aaKnown RBP17.19■□□□□ 0.34
HDDC3-205ENST00000559898 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 ACTR10Q9NZ32 417 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 HEBP2Q9Y5Z4 205 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 MED13Q9UHV7 2174 aa17.19■□□□□ 0.34
HDDC3-205ENST00000559898 PIPSLA2A3N6 862 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 HEATR9A2RTY3 570 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 KRT87PA6NCN2 255 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 TMEM150CB9EJG8 249 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 E7EVH7 732 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 IFRD1O00458 451 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 ZNF189O75820 626 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 PDGFAP04085 211 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 F7P08709 466 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CCNYL3P0C7X3 344 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 ATXN8OSP0DMR3 200 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 ADRA1DP25100 572 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 NMBRP28336 390 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CD151P48509 253 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CHAF1BQ13112 559 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 ITIH4Q14624 930 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 PLEKHS1Q5SXH7 462 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CPZQ66K79 652 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CES3Q6UWW8 571 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 UNC5AQ6ZN44 842 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 OR6P1Q8NGX9 317 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 OR4L1Q8NH43 312 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 APOBEC4Q8WW27 367 aaKnown RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 OR2A14Q96R47 310 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 TRIM56Q9BRZ2 755 aaKnown RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 PITPNM3Q9BZ71 974 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 EPN3Q9H201 632 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CHST8Q9H2A9 424 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 MVB12BQ9H7P6 319 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 C1GALT1Q9NS00 363 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 TP53TG5Q9Y2B4 290 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 TDRKHQ9Y2W6 561 aaKnown RBP17.18■□□□□ 0.34
HDDC3-205ENST00000559898 PCDHGA6Q9Y5G7 932 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
HDDC3-205ENST00000559898 SETXQ7Z333 2677 aaKnown RBP17.17■□□□□ 0.34
HDDC3-205ENST00000559898 ERI2A8K979 691 aaKnown RBP17.17■□□□□ 0.34
HDDC3-205ENST00000559898 CYSRT1A8MQ03 144 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 WISP1O95388 367 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 FGGP02679 453 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 CAPN1P07384 714 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 UGT2B7P16662 529 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 GSDMDP57764 484 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 FOXL2P58012 376 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 PRKAA1Q13131 559 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 RPA4Q13156 261 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 TRIP13Q15645 432 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-205ENST00000559898 CCNG2Q16589 344 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 AFTPHQ6ULP2 937 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 LRRC8AQ8IWT6 810 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 C2orf73Q8N5S3 287 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-205ENST00000559898 CCDC89Q8N998 374 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 C9orf43Q8TAL5 461 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-205ENST00000559898 MR1Q95460 341 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 PAK5Q9P286 719 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 ASF1AQ9Y294 204 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 KLHL20Q9Y2M5 609 aa17.17■□□□□ 0.34
HDDC3-205ENST00000559898 LIN7AO14910 233 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 CPNE3O75131 537 aaKnown RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 RORAP35398 523 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 GABRA4P48169 554 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 MC1RQ01726 317 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 TLE1Q04724 770 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 PTCHD3Q3KNS1 767 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 CRTC2Q53ET0 693 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 SPESP1Q6UW49 350 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 ZNF517Q6ZMY9 492 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 ATG14Q6ZNE5 492 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 DSELQ8IZU8 1212 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 IL17FQ96PD4 163 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 FCRL4Q96PJ5 515 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 FRMD8P1Q9BZ68 369 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 VPS37BQ9H9H4 285 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 SYBUQ9NX95 663 aa17.16■□□□□ 0.34
HDDC3-205ENST00000559898 TTC7AQ9ULT0 858 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-205ENST00000559898 GOLGA8KD6RF30 607 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 H3BMH7 237 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 GOLGA8TH3BQL2 631 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 CEP104O60308 925 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 FTH1P02794 183 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 MT-ND3P03897 115 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 CHRM5P08912 532 aaPredicted RBP17.15■□□□□ 0.34
HDDC3-205ENST00000559898 SFTPCP11686 197 aa17.15■□□□□ 0.34
HDDC3-205ENST00000559898 MGAT1P26572 445 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms