RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ZNF517Q6ZMY9 492 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-235ENST00000557740 TMEM139Q8IV31 216 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 DSELQ8IZU8 1212 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ENDOVQ8N8Q3 282 aaKnown RBP14.19□□□□□ -0.14
SHMT2-235ENST00000557740 OR1L3Q8NH93 324 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ELMO1Q92556 727 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 N4BP2L2Q92802 583 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-235ENST00000557740 HES6Q96HZ4 224 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 KLHL25Q9H0H3 589 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ACSS2Q9NR19 701 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ACTR10Q9NZ32 417 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 SERTAD3Q9UJW9 196 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 SNX7Q9UNH6 387 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 ASF1AQ9Y294 204 aa14.19□□□□□ -0.14
SHMT2-235ENST00000557740 A0A0U1RQJ8 604 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 MROH6A6NGR9 719 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 OR51F1A6NGY5 319 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 ARGFXA6NJG6 315 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 E7EVH7 732 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 F8W8V4 182 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 IFNB1P01574 187 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 RAB40ALP0C0E4 278 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 MSL3P1P0C860 447 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 PVRP15151 417 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 SHMT2P34897 504 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 FDFT1P37268 417 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 PGDP52209 483 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 ITGA1P56199 1179 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 CHAF1BQ13112 559 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 BRD3Q15059 726 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 PLEKHS1Q5SXH7 462 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 CPZQ66K79 652 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 SPESP1Q6UW49 350 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 SYTL1Q8IYJ3 562 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 ADGRF3Q8IZF5 1079 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 SLC38A9Q8NBW4 561 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 OR52K1Q8NGK4 314 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 OR5AR1Q8NGP9 310 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 TRAPPC9Q96Q05 1148 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 TTC1Q99614 292 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 NRTNQ99748 197 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 SLC25A23Q9BV35 468 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 TRIM55Q9BYV6 548 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 ICKQ9UPZ9 632 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 PRSS21Q9Y6M0 314 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 CAPN6Q9Y6Q1 641 aa14.18□□□□□ -0.14
SHMT2-235ENST00000557740 CCDC162PA2VCL2 907 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 C9J4A7 227 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 E7EQ34 232 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 KDM1AO60341 852 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 HBQ1P09105 142 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 OR56A5P0C7T3 313 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PSMA3P25788 255 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 STIP1P31948 543 aaKnown RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 FOXN2P32314 431 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 RORAP35398 523 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PTGIRP43119 386 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PLOD1Q02809 727 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PTCHD3Q3KNS1 767 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 LYPLAL1Q5VWZ2 237 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 FAM198BQ6UWH4 519 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 CDHR3Q6ZTQ4 885 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 TRIM73Q86UV7 250 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 ATCAYQ86WG3 371 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 TBC1D21Q8IYX1 336 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 GPR135Q8IZ08 494 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 C19orf47Q8N9M1 422 aaKnown RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 SPC24Q8NBT2 197 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 NLNQ9BYT8 704 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 FRMD8P1Q9BZ68 369 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 TSGA10Q9BZW7 698 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 ING2Q9H160 280 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PCMTD2Q9NV79 361 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 POLG2Q9UHN1 485 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 G3BP2Q9UN86 482 aaKnown RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 PLAAQ9Y263 795 aa14.17□□□□□ -0.14
SHMT2-235ENST00000557740 TDRKHQ9Y2W6 561 aaKnown RBP14.17□□□□□ -0.14
SHMT2-235ENST00000557740 FLNCQ14315 2725 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 LIASO43766 372 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 GOT2P00505 430 aaKnown RBP14.16□□□□□ -0.14
SHMT2-235ENST00000557740 PDGFAP04085 211 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 CHRM5P08912 532 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-235ENST00000557740 UGT2B7P16662 529 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 CCL11P51671 97 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 ZNF789Q5FWF6 425 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 LCN10Q6JVE6 187 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 RNF10Q8N5U6 811 aaKnown RBP14.16□□□□□ -0.14
SHMT2-235ENST00000557740 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 OR13J1Q8NGT2 312 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 HDAC10Q969S8 669 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 DPH2Q9BQC3 489 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-235ENST00000557740 TSSK1BQ9BXA7 367 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 ETNK1Q9HBU6 452 aa14.16□□□□□ -0.14
SHMT2-235ENST00000557740 TCFL5Q9UL49 500 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms