RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PRSS56P0CW18 603 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 MSNP26038 577 aaKnown RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 SHMT2P34897 504 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 RORAP35398 523 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 CD97P48960 835 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 LMAN1P49257 510 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 MLLT10P55197 1068 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ITGA1P56199 1179 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 PLOD1Q02809 727 aaPredicted RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 KLF1Q13351 362 aaPredicted RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ITIH4Q14624 930 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 CPZQ66K79 652 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 SYTL1Q8IYJ3 562 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 GPR135Q8IZ08 494 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ADGRF3Q8IZF5 1079 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 SLC35B2Q8TB61 432 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 N4BP2L2Q92802 583 aaPredicted RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 TTC1Q99614 292 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 XKR8Q9H6D3 395 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 PCMTD2Q9NV79 361 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 PIH1D1Q9NWS0 290 aaKnown RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ANKMY1Q9P2S6 941 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 POLG2Q9UHN1 485 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 G3BP2Q9UN86 482 aaKnown RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ASF1AQ9Y294 204 aa18.18■□□□□ 0.5
CPSF2-203ENST00000554290 ERI2A8K979 691 aaKnown RBP18.17■□□□□ 0.5
CPSF2-203ENST00000554290 CYSRT1A8MQ03 144 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 F8W8V4 182 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 PDGFAP04085 211 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 PSMA3P25788 255 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 STIP1P31948 543 aaKnown RBP18.17■□□□□ 0.5
CPSF2-203ENST00000554290 PTGIRP43119 386 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 GDF10P55107 478 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 CHAF1BQ13112 559 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 ZNF789Q5FWF6 425 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 LYPLAL1Q5VWZ2 237 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 LCN10Q6JVE6 187 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 SPESP1Q6UW49 350 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 PACS1Q6VY07 963 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 TBC1D21Q8IYX1 336 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 TAB3Q8N5C8 712 aaPredicted RBP18.17■□□□□ 0.5
CPSF2-203ENST00000554290 DNAAF3Q8N9W5 541 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 ADAMTS17Q8TE56 1095 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 ELMO1Q92556 727 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 KLHL25Q9H0H3 589 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 R3HDM2Q9Y2K5 976 aaKnown RBP18.17■□□□□ 0.5
CPSF2-203ENST00000554290 PCDHGB7Q9Y5F8 929 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 FLNCQ14315 2725 aa18.17■□□□□ 0.5
CPSF2-203ENST00000554290 CCDC78A2IDD5 438 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 TTLL8A6PVC2 850 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 C9J4A7 227 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 KDM1AO60341 852 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 TMEM63AO94886 807 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 FTCDO95954 541 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 OR56A5P0C7T3 313 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 PVRP15151 417 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 AGXTP21549 392 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 SRSF1Q07955 248 aaKnown RBP eCLIP18.16■□□□□ 0.5
CPSF2-203ENST00000554290 CDH17Q12864 832 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 BRD3Q15059 726 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 SYTL3Q4VX76 610 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 CDHR3Q6ZTQ4 885 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 MICALCLQ6ZW33 695 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 FAM26EQ8N5C1 309 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 EFCAB3Q8N7B9 438 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 OR5AR1Q8NGP9 310 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 TCTN2Q96GX1 697 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 NRTNQ99748 197 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 ICKQ9UPZ9 632 aa18.16■□□□□ 0.5
CPSF2-203ENST00000554290 HEATR9A2RTY3 570 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 CLEC18AA5D8T8 446 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 ZNF749O43361 778 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 VPS4BO75351 444 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 RRADP55042 308 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 PTCHD3Q3KNS1 767 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 PAPD7Q5XG87 772 aaKnown RBP18.15■□□□□ 0.5
CPSF2-203ENST00000554290 FAM198BQ6UWH4 519 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 CLEC18BQ6UXF7 455 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 UNC5AQ6ZN44 842 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 MED25Q71SY5 747 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 C19orf47Q8N9M1 422 aaKnown RBP18.15■□□□□ 0.5
CPSF2-203ENST00000554290 CLEC18CQ8NCF0 446 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 OR52K1Q8NGK4 314 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 HES6Q96HZ4 224 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 C17orf62Q9BQA9 187 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 OR6C2Q9NZP2 312 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 VPS4AQ9UN37 437 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 PADI2Q9Y2J8 665 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 ZNF451Q9Y4E5 1061 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 PRSS21Q9Y6M0 314 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 AP1M2Q9Y6Q5 423 aa18.15■□□□□ 0.5
CPSF2-203ENST00000554290 TCRBV7S2A1N4TA0A589 114 aa18.14■□□□□ 0.49
CPSF2-203ENST00000554290 CCDC162PA2VCL2 907 aa18.14■□□□□ 0.49
CPSF2-203ENST00000554290 OR51F1A6NGY5 319 aa18.14■□□□□ 0.49
CPSF2-203ENST00000554290 OR2B3O76000 313 aa18.14■□□□□ 0.49
CPSF2-203ENST00000554290 CAPN1P07384 714 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms